Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01749 ATGGATGGAGTACATCACCGGAGGTTCTACTTCACCCCATTTCTTGTCGCCTTGGTCGGCTTCATGTTTGTCACATTTGTTCTCACGATTGTCCTCGTAATCTACCATTGCGTTGCTCTTGGTTGGTGCAGTCGAATCCGGAACCTCACACGACGCCAAGGCCTTCATCGTCCAGAACAAGAAGAGACGCCGAGTTGCTTGGAGAATTCTACGGTACAACTCATCCCAGCATATAGGTACACAAAGGAGGGTGGGTTGGTGGACGGTGGTGACGAAGGCACGTGTGCTGTGTGCTTGTGTGAGTTCAAGGAAGGGGAGGAAGTGCGTATATTGCCCCACTGCACACACTCCTTTCATGTGCCTTGTATTGACATGTGGCTCTATTCTCACTCCAATTGTCCGCTGTGTCGCACCAAAACTGCCACTCCACAGCACTCACTGCGGCCTCCAACAGATTCTGCTGCGTTTACTCGCCTAGAATCACACCGGTTGCTGGATTTTGGTGGATAG 510 0.5137 MDGVHHRRFYFTPFLVALVGFMFVTFVLTIVLVIYHCVALGWCSRIRNLTRRQGLHRPEQEETPSCLENSTVQLIPAYRYTKEGGLVDGGDEGTCAVCLCEFKEGEEVRILPHCTHSFHVPCIDMWLYSHSNCPLCRTKTATPQHSLRPPTDSAAFTRLESHRLLDFGG* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01749 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 143 IPR013083 -
Eupl01g01749 169 SUPERFAMILY RING/U-box 94 143 - -
Eupl01g01749 169 CDD RING-H2_EL5-like 95 137 - -
Eupl01g01749 169 SMART ring_2 95 136 IPR001841 -
Eupl01g01749 169 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Eupl01g01749 169 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 140 IPR044675 -
Eupl01g01749 169 Pfam Ring finger domain 94 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01749 Eupl-Chr1 39140705 39141214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01749 13 137 C3H Transcription Factor Family AT3G03550 36.424 3.17e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01749 - - nnu:104593998 165.622