LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl01g01744	ATGGCGAAAACCCTAATTTCATCACCTTCTTTTCTCGGTACTCCACTTCCTTCGCTCTCTCGCCACGGCTTCCACAGATTTCCTCTATTCAGACCTCTTCGCAAACTCAACGACACCAGAGTGAAGTTCAGCTTCCATGAGATCCCTCCTCTTCATTCCTTTGATTCCTCTATTGATTTTCATGGAATTGTTAGCCGAACAGAAGGTCTGTTATACACGCTCGCAGACGCCGCTGTTGTTGCTGCAGACTCGGCTTCCAGTGGTGCTGCCGCTGGTTCGAGCGATGAGGCGGTTCAGAAGAACGGAGGGTGGTTCGGGTTCATCTCCGATGCCATGGAAGTTGTGTTGAAGGTGCTGAAGGATGGACTTACTGCTGTACATGTCCCTTATGCATATGGATTTGCGATTATCTTGCTCACTGTTATTGTTAAAGTGGCCACATTGCCTTTGACAAAGAAGCAGGTTGAATCAACACTCGCTATGCAAAACCTTCAGCCAAAGATCAAAGCTATTCAAGAAAGATATGCGGGCAATCAGGAAAGAATACAACTTGAGACATCACGCCTTTACAAACAAGCTGGGGTTAATCCATTGGCAGGATGTTTCCCAACATTGGCTACAATACCAGTTTGGATTGGTTTATATCAAGCTCTTTCAAATGTAGCAAATGAGGGATTGCTGACGGAAGGTTTCTTCTGGATTCCCTCTTTGGGAGGCCCAACCTCAATTGCTGCTCGACAGAGTGGATCTGGCATTTCCTGGCTTATTCCATTTGTGGATGGACATCCACCATTGGGCTGGCATGATACTGCAGCATACCTTGTTTTACCTGTCCTCCTTGTTGCTTCTCAGTATGTTTCGATGGAGCTCATGAAACCACCACAGACTGATGATCCTGCACAAAAGAACACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTTTCGTTGTCGGTCCCGTCAGGGTTATCAATTTACTGGTTCACGAACAACGTCCTCAGCACAGCACAACAAGTGTGGTTACGGAAGCTAGGTGGTGCAAAATCTGTATTGAGTGAGAATGCAAGTGGAATAATTAGTGCAGGACAAGCAAAACGCTCAACTTCTCAGCCAGTACGGAATGGTGACAGGTTTAGGCAATTAAAAGAAGAAGAGACGAAGAAAAAATTGAACAAGGCTGTGCCAGCACAAGAGATTCAGATTCTGGCTTCAACATCTGATTCTGATGACTTCTCTGACGAAGAGGCAAAGGACAAGGATGAAGAAGCCCAAGAAGAGGCATATACATCTAGTGGTAGCAAACAGCGTCCAGATTATTCTGGTCCGAGGAGGAGCAAGCGATCAAAGCGGAAGCGCAAGGTTGTGCAGGTCCAAGCTTGA	1389	0.46	MAKTLISSPSFLGTPLPSLSRHGFHRFPLFRPLRKLNDTRVKFSFHEIPPLHSFDSSIDFHGIVSRTEGLLYTLADAAVVAADSASSGAAAGSSDEAVQKNGGWFGFISDAMEVVLKVLKDGLTAVHVPYAYGFAIILLTVIVKVATLPLTKKQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTSIAARQSGSGISWLIPFVDGHPPLGWHDTAAYLVLPVLLVASQYVSMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKSVLSENASGIISAGQAKRSTSQPVRNGDRFRQLKEEETKKKLNKAVPAQEIQILASTSDSDDFSDEEAKDKDEEAQEEAYTSSGSKQRPDYSGPRRSKRSKRKRKVVQVQA*	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl01g01744	462	PANTHER	OXA1	73	391	IPR001708	GO:0016020\|GO:0032977
	Eupl01g01744	462	MobiDBLite	consensus disorder prediction	446	462	-	-
	Eupl01g01744	462	NCBIfam	membrane protein insertase YidC	132	345	IPR028055	-
	Eupl01g01744	462	CDD	5TM_YidC_Alb3	133	346	IPR047196	-
	Eupl01g01744	462	MobiDBLite	consensus disorder prediction	406	462	-	-
	Eupl01g01744	462	Pfam	60Kd inner membrane protein	132	346	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl01g01744	Eupl-Chr1	39102204	39115257	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl01g01744	30	397	Chloroplast and Mitochondria Gene Families	AT2G28800	72.193	0.0	536

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl01g01744	K03217		-	nnu:104594574	699.123