Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01735 ATGTCTAGTGCTTTGGACATGTCTCTCGACGATCTGATCAAGAACAACAAGAGATCTGGCGGAGGAGGCGGTAGAGGCAGAGGTTCTGGTCCAGGTCCAGCTCGACGATTTCCGAATCGCGGCGCAAGTCGAACCACGCCTTACTCTATGGGAAAGCCGGTTCAGGCGCCGGATTCAACGTGGACGCACGACATGTTTGCAGATCAGGTGGCAGCATATCCGGCGAAGGGAGGTCGAGCGTCTGCGTTAGAGACGGGCTCCAAGCTCTACATTTCCAACTTAGATTATGGCGTCTCGAACGAGGACATCAAGGAACTCTTTGCAGAGGTCGGTGACCTGAAACGATATTCAATCCATTATGATAGGAGTGGAAGATCAAAGGGAACGGCAGAAGTGGTCTTTTCACGGCGGGCAGATGCTGTAGCAGCTGTCAAGAGATACAACAATGTCCAGCTCGATGGGAAGCCGATGAAAATAGAGATTGTGACTCCTGCTGCTGTGCCTCCGATTACAAATGGCATACTCGGAAATCCAAATGGCATACTCGGAAATCCAAACGGCGTTCCCAGAAGTGGACAAGGAAGGGGTGGAGCTATGGGACGACCTCGCGGTGGCGGCGGTGGCGGTGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGCGGCGGCGGTAACAGCAGTGGCGGACGTGGTTTTGGGAGGGGCCGTGGACGGGGGAGAGGCCGTGGTGAAAAAGTATCTGCGGAAGATCTTGATGCTGACTTGGAAAAGTACCACACAGAAGCAATGCAAATAAACTAA 798 0.5464 MSSALDMSLDDLIKNNKRSGGGGGRGRGSGPGPARRFPNRGASRTTPYSMGKPVQAPDSTWTHDMFADQVAAYPAKGGRASALETGSKLYISNLDYGVSNEDIKELFAEVGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVTPAAVPPITNGILGNPNGILGNPNGVPRSGQGRGGAMGRPRGGGGGGGGGGGGGGGGGGGGNSSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHTEAMQIN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01735 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 164 IPR000504 GO:0003723
Eupl01g01735 265 Gene3D - 72 251 IPR012677 -
Eupl01g01735 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
Eupl01g01735 265 CDD RRM_THOC4 87 161 - -
Eupl01g01735 265 MobiDBLite consensus disorder prediction 42 56 - -
Eupl01g01735 265 SUPERFAMILY RNA-binding domain, RBD 82 195 IPR035979 GO:0003676
Eupl01g01735 265 Pfam C-terminal duplication domain of Friend of PRMT1 209 259 IPR025715 -
Eupl01g01735 265 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 263 - -
Eupl01g01735 265 MobiDBLite consensus disorder prediction 183 265 - -
Eupl01g01735 265 SMART FoP_duplication_2 194 265 IPR025715 -
Eupl01g01735 265 MobiDBLite consensus disorder prediction 1 60 - -
Eupl01g01735 265 MobiDBLite consensus disorder prediction 236 258 - -
Eupl01g01735 265 SMART rrm1_1 88 160 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01735 Eupl-Chr1 38956570 38964898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01735 86 161 Eukaryotic Initiation Factors Gene Family AT2G23350 36.842 5.42e-09 54.7