Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01711 ATGCCTCACCCTCCTTACTACCCTGAAGGCCAAAACCCTAGTTTTTGTTCTCCAACAGTCCACAGGGCAGCGGCAACATATCTGCAGTCAACTTTAGCGAGGATGGTGAGAGTCAGTGTTTTAAATGATGCTCTTAAAAGTATGTATAATGCGGAGAAGCGGGGGAAGCGGCAGGTCATGATCAGACCATCCTCAAAAGTGATCATCAAGTTTCTCCTTGTCATGCAGAAGCATGGTTATATTGGGGAGTTTGAGTATGTTGATGATCACAGGTCTGGCAAAATTGTGGTTGAACTGAATGGAAGACTCAACAAATGTGGGGTCATCAGTCCTCGTTTTGACGTTGGTGTTAAAGAAATTGAGCCATGGACTGCGAGGTTGCTTCCCTCGAGACAGGTTAGCTTAAGCCTCTAG 414 0.4589 MPHPPYYPEGQNPSFCSPTVHRAAATYLQSTLARMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQVSLSL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01711 137 FunFam 40S ribosomal protein S15a 35 103 - -
Eupl01g01711 137 PANTHER 40S RIBOSOMAL PROTEIN S15A 35 133 IPR000630 GO:0003735|GO:0005840|GO:0006412
Eupl01g01711 137 Gene3D - 35 103 - -
Eupl01g01711 137 Pfam Ribosomal protein S8 41 120 IPR000630 GO:0003735|GO:0005840|GO:0006412
Eupl01g01711 137 SUPERFAMILY Ribosomal protein S8 38 134 IPR035987 GO:0003735|GO:0005840|GO:0006412
Eupl01g01711 137 Gene3D - 104 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01711 Eupl-Chr1 38676228 38681646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01711 35 132 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.939 5.74e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01711 K02957 - han:110936430 204.142