Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01696 ATGGCTCCTCCATCTAAAGTTGGCACCACAAAGAAGAATGACCCAAAGGCACAAGCCTTGAAGGCTGCCAAGGCAGTAAAATCAGGTGCAGCAACCATAAAGAAGAAAGCCAAGAAGATCAGAACGTCGGTCACATTTCATCGCCCAAAGACATTGAAGAAGGACAGAAACCCCAAGTACCCTCGTATTAGTGGGCCCCCGAGGAACAAGCTCGACCATTATCAGATTCTAAAATATCCCCTCACAACTGAATCTGCAATGAAGAAGATTGAAGACAACAACACACTGGTATTCATTGTTGATATCCGTGCAGACAAGAAGAAGATCAAGGCTGCAGTGAAGAAGATGTATGACATTCAAACCAAGAAAGTGAATACCTTGATCAGGCCTGATGGAACCAAGAAGGCGTACGTGAGGTTGACTCCAGATTACGATGCTTTGGATGTTGCGAACAAGATTGGGATAATTTAG 471 0.4437 MAPPSKVGTTKKNDPKAQALKAAKAVKSGAATIKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISGPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01696 156 Pfam Ribosomal protein L23 76 138 IPR013025 GO:0003735|GO:0005840|GO:0006412
Eupl01g01696 156 MobiDBLite consensus disorder prediction 1 20 - -
Eupl01g01696 156 MobiDBLite consensus disorder prediction 47 68 - -
Eupl01g01696 156 Gene3D - 37 156 IPR012677 -
Eupl01g01696 156 PANTHER 60S RIBOSOMAL PROTEIN L23A 9 156 IPR013025 GO:0003735|GO:0005840|GO:0006412
Eupl01g01696 156 FunFam 60S ribosomal protein L23a 34 156 - -
Eupl01g01696 156 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 73 149 IPR012678 GO:0003735|GO:0005840|GO:0006412
Eupl01g01696 156 Hamap 50S ribosomal protein L23 [rplW]. 76 156 IPR013025 GO:0003735|GO:0005840|GO:0006412
Eupl01g01696 156 Pfam Ribosomal protein L23, N-terminal domain 16 66 IPR005633 -
Eupl01g01696 156 ProSitePatterns Ribosomal protein L23 signature. 134 149 IPR001014 GO:0019843
Eupl01g01696 156 NCBIfam 50S ribosomal protein L23 80 156 IPR019985 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01696 Eupl-Chr1 38500297 38504276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01696 4 156 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 88.889 7.13e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01696 K02893 - nnu:104586697 278.1