Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl01g01694 | ATGAAGACGAGACTCTCTACTACCGCTACTCCTCTGCCCCCCCCATCATCCTCGTCAGCCCAAGATTTATCCAAAACCTCAAAGAGATCAAGCGGCAGCGGAGGCCTCGCCCCATCGAAATCAACGGTGTATGTTGGCAATCTGGACTACAACCTCACAAACTCCGACCTCTTCACCATATTCTCCACCTTCGGCAAGGTCGCCAAGGTCACCGTCCTTAAAGATCGCCAATCACGCCGCAGCCGTGGCATCGCCTTTGTTCTCTTCGTCTCTCAAGACGATGCCCGCAAAACCGTACAAGAGATGCAGGGCAAGGCTTTGAACAACGGACTCTAA | 336 | 0.5327 | MKTRLSTTATPLPPPSSSSAQDLSKTSKRSSGSGGLAPSKSTVYVGNLDYNLTNSDLFTIFSTFGKVAKVTVLKDRQSRRSRGIAFVLFVSQDDARKTVQEMQGKALNNGL* | 112 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl01g01694 | 111 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 43 | 109 | IPR000504 | GO:0003723 | |
Eupl01g01694 | 111 | Gene3D | - | 8 | 110 | IPR012677 | - | |
Eupl01g01694 | 111 | SMART | rrm1_1 | 42 | 111 | IPR000504 | GO:0003723 | |
Eupl01g01694 | 111 | SUPERFAMILY | RNA-binding domain, RBD | 31 | 109 | IPR035979 | GO:0003676 | |
Eupl01g01694 | 111 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 41 | 111 | IPR000504 | GO:0003723 | |
Eupl01g01694 | 111 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Eupl01g01694 | 111 | PANTHER | ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 | 19 | 108 | IPR044598 | GO:0000398|GO:0005689 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl01g01694 | Eupl-Chr1 | 38450900 | 38489886 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl01g01694 | 41 | 109 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 34.783 | 1.14e-08 | 49.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl01g01694 | K13154 | - | ming:122058144 | 146.362 |