Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01661 ATGGGGAAAGGAGGGCAAAATTATGGGCAACGAGGTAATAGTGGCTCCTCCGAACCCCCCGACCGGGAAATCTTCCCGGCTTGGGCGAGAGACGTTCAAGATTGCATGGCGAAGTTCAAGGTGGAGAGAGAATTTGGTTTGACATCGCAAGAAGTTGAGGAACGGCGTAAGATCTATGGCTGGAATGAGTTGGAGAAGCACGAGGGTCCATCAATCTGGAGGCTGATTCTGGACCAGTTCAATGATACTCTAGTGCGGATTCTACTTGTCGCAGCTGTTATTTCCTTCGTCCTCGCTTGGTACGACGGCGACGAGGGGGGCGAGATGGGAATCACAGCTTTCGTAGAGCCTCTCGTGATTTTCCTGATCTTGATTGTGAACGCCATTGTTGGAGTCTGGCAAGAGAGCAACGCCGAGAAGGCCCTAGAAGCCCTGAAGGAAATCCAATCCGAGCATGCCACTGTTATACGTGAAGGGAAACGTATCACCCATCTGCCTGCAAAGGAGCTCGTCCCGGGTGATATTGTTGAGCTCAGGGTTGGCGACAAAGTCCCAGCAGATATGCGGGTTTTGAGTCTGATAAGCTCCACTGCCAGGCTTGAACAGGGCTCATTGACGGGAGAGAGTGAAGCGGTTAACAAGACTAACAAGGCTGTTCCGGCGGATACGGACATTCAAGGGAAAAAATGTATGGTTTTTGCTGGGACCACTGTTGTGAATGGCAACTGCTTCTGCTTGGTCACTCAGATCGGTATGAGCACAGAGATTGGGAAGGTGCATTCTCAGATTCACGAAGCTTCACAGAGCGAAGAAGATACCCCACTGAAAAAGAAGCTGAATGAATTCGGAGAGGTCCTCACAGCCATAATTGGAGTGATCTGTGCACTTGTATGGCTCATCAATGTGAAGTACTTCTTTACTTGGGAATATGTGGATGGTTGGCCGAGGAATTTTAAGTTCTCTTTTGAGAAGTGCACGTACTACTTTGAGATTGCAGTGGCATTGGCAGTGGCTGCTATTCCAGAAGGTTTGCCTGCAGTAATCACAACCTGCTTGGCACTGGGCACACGAAAAATGGCTCAAAAGAATGCACTTGTACGGAAGTTGCCAAGCGTCGAGACTCTGGGTTGTACGACAGTAATTTGCTCTGATAAGACAGGTACGCTGACTACCAATCAGATGGCAGTGGCGAAGCTTGTGGCGATGGGCCCTAGGAAGGACATGGTCCGGACCTTCAGAGTAGACGGGACCACATACAATCCTTTTAATGGGAGAATACATGACTGGCCGGCTGGTCGTATGGATGCAAATCTTCAAATGATCGCAAAGATCGCTGCTGTGTGCAATGATGCCGGTGTTACACAATCAGGGCATCAGTATGTTGCCAATGGAATGCCAACTGAGGCCGCACTTAAGGTTTTGGTTGAGAAAATGGGGCTTCCTGAAGGATTTGATCGTTCATCTTCGAGTTCTTCTGATGTTGTACTACGTTGTTGTCAACGTTGGAATGACGTTGAACATCGAATTGCAACTCTTGAGTTTGACCGTGATAGGAAGTCTATGGGAGTTATTGCAAAGTCAGACTCAGGAAGAAATTCATTACTAGTGAAGGGTGCTGTCGAGAATTTATTGGAGAGAAGCACCTACATTCAGTTGCTTGATGGCTCTGTTGCAAAGTTGGATCAAAGTTCGAGAAGCCTTATTTTACAAGCCCTTAATGAAATGTCCACGACTGCATTACGCTGTTTGGGTTTTGCGTACAAGGTGGAGCTCGCCGAATTTGCAACATATGATGGTGATGAAGATCATCCAGCTCATGAGCTTTTACTCAACCCATCCAATTATTCATCAATTGAGAGTGATCTCATTTTTGTTGGCTTGGTTGGGCTGAGGGATCCTCCTCGAGAAGAGGTACACAAAGCAATTGAGGATTGCAGAGCAGCTGGTATCCGTGTTATGGTTATTACAGGAGATAACCAGAATACAGCAGAAGCAATTTGTCGTGAAATTGGTGTATTTGGACCTAAAGAAGACATTAGTTCGAAAAGCTTAACTGGGAGAGAATTTACGGATCTTCATGATCAGAAAAAACATTTAAGGCAAAGTGGTGGGCTTCTCTTCTCTAGGGCTGAACCGAAGCATAAACAAGAGATAGTGAGGTTGCTTAAAGAAGATGGAGAGGTGGTTGCTATGACTGGTGATGGAGTGAATGATGCCCCTGCTTTGAAATTGGCAGATATTGGAATTGCAATGGGCATTGCTGGAACTGAGGTTGCAAAGGAAGCCTCTGACATGGTGTTAGCAGATGATAATTTCAATACAATAGTTGCTGCTGTTGGCGAAGGCAGATCTATCTATAACAATATGAAGGCTTTTATCAGGTACATGATCTCCTCAAATATTGGTGAGGTTGCCTCTATATTTCTAACAGCGGCTTTAGGAATTCCAGAAGGCCTGATCCCCGTTCAGCTTCTATGGGTTAATCTTGTTACTGATGGCCCCCCTGCAACAGCTTTGGGATTCAATCCACCAGATATGGATATAATGAAGAAACCCCCTCGAAGAAGTGATGACTCCTTAATCAGTCCTTGGATCTTATTCCGCTATCTGGTGATTGGGCTCTATGTTGGTGTAGCAACCGTGGGTGTCTTTATCATCTGGTTTACACATGGGTCCTTCTTGGGCATTGACCTGACCGGGGATGGCCACACTCTTGTCACCTATTCCCAGCTCTCCAACTGGGGACAGTGTCCATCTTGGGAGGGCTTCACGGTTGCCCCCTTCACGGCTGGAGCTCGGGTGTTCTCTTTTGACAACAACCCATGTGACTATTTCCATACTGGCAAAGTGAAAGCCATGACCCTCTCCCTCTCTGTCTTGGTCGCCATCGAGATGTTCAACTCCCTCAATGCCCTGTCTGAGGATGGAAGCCTCTTGACGATGCCCCCATGGGTCAATCCATGGCTCCTCGTGGCCATGTCTGTCTCTTTTGGCCTGCACTTCTTGATCCTTTATGTGCCATTCCTTGCTCAAGTGTTTGGCATTGTGCCTCTCAGCCTGAGGGAGTGGCTCTTGGTGTTGGCTGTTGCATTCCCAGTAATCCTGATTGATGAGATTCTCAAGTTTGTGGGACGGTCTACAAGTGGATTACGTGCTTCTTGCAACAGGAAATCGTCGAAGCGCAAGGTAGAGTGA 3195 0.4742 MGKGGQNYGQRGNSGSSEPPDREIFPAWARDVQDCMAKFKVEREFGLTSQEVEERRKIYGWNELEKHEGPSIWRLILDQFNDTLVRILLVAAVISFVLAWYDGDEGGEMGITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHATVIREGKRITHLPAKELVPGDIVELRVGDKVPADMRVLSLISSTARLEQGSLTGESEAVNKTNKAVPADTDIQGKKCMVFAGTTVVNGNCFCLVTQIGMSTEIGKVHSQIHEASQSEEDTPLKKKLNEFGEVLTAIIGVICALVWLINVKYFFTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAMGPRKDMVRTFRVDGTTYNPFNGRIHDWPAGRMDANLQMIAKIAAVCNDAGVTQSGHQYVANGMPTEAALKVLVEKMGLPEGFDRSSSSSSDVVLRCCQRWNDVEHRIATLEFDRDRKSMGVIAKSDSGRNSLLVKGAVENLLERSTYIQLLDGSVAKLDQSSRSLILQALNEMSTTALRCLGFAYKVELAEFATYDGDEDHPAHELLLNPSNYSSIESDLIFVGLVGLRDPPREEVHKAIEDCRAAGIRVMVITGDNQNTAEAICREIGVFGPKEDISSKSLTGREFTDLHDQKKHLRQSGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFNTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDMDIMKKPPRRSDDSLISPWILFRYLVIGLYVGVATVGVFIIWFTHGSFLGIDLTGDGHTLVTYSQLSNWGQCPSWEGFTVAPFTAGARVFSFDNNPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLVAMSVSFGLHFLILYVPFLAQVFGIVPLSLREWLLVLAVAFPVILIDEILKFVGRSTSGLRASCNRKSSKRKVE* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01661 1064 SUPERFAMILY Calcium ATPase, transmembrane domain M 27 1045 IPR023298 -
Eupl01g01661 1064 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 392 633 - -
Eupl01g01661 1064 NCBIfam HAD-IC family P-type ATPase 119 309 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g01661 1064 NCBIfam HAD-IC family P-type ATPase 321 403 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g01661 1064 NCBIfam HAD-IC family P-type ATPase 706 813 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g01661 1064 SMART Cation_ATPase_N_a_2 26 100 IPR004014 -
Eupl01g01661 1064 FunFam Calcium-transporting P-type ATPase, putative 628 777 - -
Eupl01g01661 1064 PRINTS P-type cation-transporting ATPase superfamily signature 756 768 - -
Eupl01g01661 1064 PRINTS P-type cation-transporting ATPase superfamily signature 201 215 - -
Eupl01g01661 1064 PRINTS P-type cation-transporting ATPase superfamily signature 626 637 - -
Eupl01g01661 1064 PRINTS P-type cation-transporting ATPase superfamily signature 732 751 - -
Eupl01g01661 1064 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Eupl01g01661 1064 PRINTS P-type cation-transporting ATPase superfamily signature 648 658 - -
Eupl01g01661 1064 Pfam Cation transporter/ATPase, N-terminus 28 95 IPR004014 -
Eupl01g01661 1064 PANTHER CALCIUM-TRANSPORTING ATPASE 30 1051 - -
Eupl01g01661 1064 Coils Coil 138 158 - -
Eupl01g01661 1064 SUPERFAMILY HAD-like 380 836 IPR036412 -
Eupl01g01661 1064 SUPERFAMILY Calcium ATPase, transduction domain A 150 261 IPR008250 -
Eupl01g01661 1064 Pfam haloacid dehalogenase-like hydrolase 379 746 - -
Eupl01g01661 1064 Gene3D - 392 633 IPR023299 GO:0000166
Eupl01g01661 1064 Gene3D - 78 1045 - -
Eupl01g01661 1064 MobiDBLite consensus disorder prediction 1 21 - -
Eupl01g01661 1064 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 796 1050 - -
Eupl01g01661 1064 Pfam E1-E2 ATPase 148 362 - -
Eupl01g01661 1064 Pfam Cation transporting ATPase, C-terminus 817 1043 IPR006068 -
Eupl01g01661 1064 SFLD Haloacid Dehalogenase 363 784 - -
Eupl01g01661 1064 SFLD p-type atpase 363 784 IPR044492 -
Eupl01g01661 1064 ProSitePatterns E1-E2 ATPases phosphorylation site. 384 390 IPR018303 -
Eupl01g01661 1064 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 243 397 - -
Eupl01g01661 1064 Gene3D - 379 777 IPR023214 -
Eupl01g01661 1064 Gene3D - 46 266 - -
Eupl01g01661 1064 FunFam Calcium-transporting ATPase, putative 128 264 - -
Eupl01g01661 1064 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 389 630 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01661 Eupl-Chr1 38056967 38070063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01661 1 1064 Primary Pumps ATPases(2) AT1G07670 80.169 0.0 1755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01661 K01537 - nnu:104594684 1832.38