Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01660 ATGTCTCGTGTCGGAGTTGAGAACCATTTTCCTGCAGAATTACGGTTTTTCAACCCTGGACAAGCAATGGAGCTCGATTATCAGGACCAGAGTGGTATCGCTGGAGTGTCGCCGACGCTGGGTGAGCTCTTGAAGCGTGTTGGAGATGCGCGGAACGAGGGTGGAGACGAGACTCCGCCGCACCAGGTGCTCCAGTTAAGCGACACGAGTCTTGAGCCGAGACCTCTCCCTTTCGTTCTGTCGTTCAGTAGTCTGACTTACAGCGTCAAGACTCGACGGAAACTAACAATTCCCACGTGTTTGCTCCGGAAGAATAAGCTCGGAGCTGCGGCGGATCCGGTGGATCAGACTGAGAGTAGGTTCTCCAACACGAAGACTCTGTTGAATGATATCTCCGGCGAAGCCAAAGATGGGGAGGTCCTCGCCGTTCTTGGCGCCAGTGGATCAGGAAAATCGACGTTGATCGATGCCCTCGCAAATCGGATCGCGAAGGGGAGCTTGAAGGGATCGATTACTTTAAATGGCGAAGCTCTAGAGTCTCGACTTCTAAAGGTTATCTCGGCGTATGTGATGCAAGACGATCTGCTCTTCCCAATGTTAACAGTCGAAGAGACGCTCATGTTCTCAGCCGAGTTCAGACTACCTCGTTCACTCTCGAAATCGAAGAAGAAAGAGAGAGTTCAAGCTCTGATCGATCAGCTAGGGCTGAGAAGAGCAGCGAAGACGGTGATAGGAGACGAAGGTCACAGAGGCGTCTCCGGTGGCGAACGTCGCCGTGTCTCGATCGGAATCGACATAATTCACGATCCGATCATATTGTTTCTCGACGAACCGACATCGGGGCTCGACTCGACGAGCGCTTACATGGTGGTGAAGGTCCTGCAACGGATCGCTCAGAGCGGGAGCATTGTAATCATGTCGGTTCACCAACCGAGTTACAGAATTCTTGGTCTGCTCGACCGTTTGATCTTTCTTTCACGCGGACAAACCGTATACAGTGGTTCACCTGCGAATCTCCCGCTTTTCTTCGCCGAGTTTGGCCATCCGATCCCAGAAAAAGAGAATCGGACTGAATTCGCGCTCGATTTGATACGTGAACTCGAAGGATCGCCGGGTGGGACCGAAAGCCTGGTTGAATTCAACAAGTCATGGAAGACCATGACTATTAATCCTCGAAATTCCGATCCTGATCGATTGGGTCTATCGCTGAAAGACGCGATAAGCGCCAGTATTTCAAGGGGGAAACTAGTTTCCGGTGCGTCGAACGATGCCAACCCTACATCGACGATGGCAACCTTCGCGAATCCATTCTGGACTGAAATCGTTGTGTTATCTAAACGATCCATAACGAATACCAGACGAATGCCGGAGCTATTCGGGATCCGATTGGGAGCAGTTCTTGTTACAGGCTTCATCTTAGCAACCATGTTCTGGCAGCTCGACAATTCACCTAGAGGTGTACAAGAACGATTAGGGTTCTTCGCTTTCGCCATGTCGACTACCTTCTACACCTGTGCCGATGCTCTCCCTGTCTTCCTCCAAGAACGTTACATCTTCATGCGAGAAACCGCTTATAACGCTTATCGTCGTTCATCCTACGTTCTGTCTCATTCAATTGTTGCCATACCTTCCCTAATCTTCCTCTCCGTCGCATTCGCAGCAACAACATTCTGGGCGGTTGGTCTTGCAGGTGGATTTTCAGGGTTCATCTTCTACTTCTTCATAATTTTGGCTTCGTTCTGGGCTGGGAGTTCGTTCGTGACTTTCCTCTCTGGAGTAGTCTCTCATGTTATGCTGGGATACACTGTTGTCGTCGCCATACTTGCTTATTTTCTTCTCTTTAGTGGGTTCTTCATTAATCGGGATCGAATTCCGCCATACTGGATTTGGTTCCATTATATCTCTTTGGTGAAATATCCATTTGAGGCGGTGTTGCAGAATGAATTCGACTACACAACCAAATGCTTCATTAGGGGAGTTCAGATCTTCGATAACACGCCACTCGGGGTTGTTCCTGCTGCCATGAAAGTTAATTTGTTGAAGTCGTTGAGCAGTTCGTTGGGTATGAACATTACGAGTAGCAGCTGCGTCACGACTGGATCGGACATCTTGAAGCAGCAAGGTATTACTGATCTGAGCAAATGGAATTGCTTGTGGATTACAGTAGCTTGGGGGTTCTTCTTTAGGATTCTATTCTACTTCTCTTTGTTGTTGGGGAGCAAGAACAAGAGGAGGTAG 2238 0.4924 MSRVGVENHFPAELRFFNPGQAMELDYQDQSGIAGVSPTLGELLKRVGDARNEGGDETPPHQVLQLSDTSLEPRPLPFVLSFSSLTYSVKTRRKLTIPTCLLRKNKLGAAADPVDQTESRFSNTKTLLNDISGEAKDGEVLAVLGASGSGKSTLIDALANRIAKGSLKGSITLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKERVQALIDQLGLRRAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRLIFLSRGQTVYSGSPANLPLFFAEFGHPIPEKENRTEFALDLIRELEGSPGGTESLVEFNKSWKTMTINPRNSDPDRLGLSLKDAISASISRGKLVSGASNDANPTSTMATFANPFWTEIVVLSKRSITNTRRMPELFGIRLGAVLVTGFILATMFWQLDNSPRGVQERLGFFAFAMSTTFYTCADALPVFLQERYIFMRETAYNAYRRSSYVLSHSIVAIPSLIFLSVAFAATTFWAVGLAGGFSGFIFYFFIILASFWAGSSFVTFLSGVVSHVMLGYTVVVAILAYFLLFSGFFINRDRIPPYWIWFHYISLVKYPFEAVLQNEFDYTTKCFIRGVQIFDNTPLGVVPAAMKVNLLKSLSSSLGMNITSSSCVTTGSDILKQQGITDLSKWNCLWITVAWGFFFRILFYFSLLLGSKNKRR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01660 745 ProSitePatterns ABC transporters family signature. 252 266 IPR017871 GO:0005524|GO:0016887
Eupl01g01660 745 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 61 731 - -
Eupl01g01660 745 Pfam ABC-2 type transporter 440 649 IPR013525 GO:0016020|GO:0140359
Eupl01g01660 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 339 IPR027417 -
Eupl01g01660 745 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 102 352 IPR003439 GO:0005524
Eupl01g01660 745 Pfam ABC transporter 128 280 IPR003439 GO:0005524
Eupl01g01660 745 Pfam ABC-2 type transporter 309 397 IPR043926 GO:0140359
Eupl01g01660 745 Gene3D - 114 341 IPR027417 -
Eupl01g01660 745 FunFam ABC transporter G family member 6 117 343 - -
Eupl01g01660 745 SMART AAA_5 137 329 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01660 Eupl-Chr1 38047291 38050170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01660 127 312 Calmodulin-binding Proteins AT2G36910 30.159 1.56e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01660 K05681 - mof:131167059 1154.81