Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01643 ATGTCACCGGCAGCTTCAACCAGATGGTGTCCGACACCGGAGCAGCTTATGATACTCGAGGAGATGTATAGAGGAGGGATAAGGACTCCTAACGCCTCTCAGATACAACAAATTACTGCCCATCTTTCTTTTTATGGAAAGATTGAAGGGAAAAACGTTTTCTATTGGTTTCAAAACCATAAAGCAAGAGATAGGCAGAAGCTTAGAAGGAAACTCAGTAGACAACAACAACAACTTCAGCACCATCACCATCACCATCACCAACATCTTCTTCACCATTTTGAAACTTCCGCCTCTTCTGGGCTTCACCATCAACATGTCCCCCATTATAACTCAGTCCAGTTTCTTCCCCAGGAAGGACTGCAAGAGGCAACAGCCCAAGTGATGAATTACACATGGAAGGTGAATATTTCGGAGAGGGACGAGATGGAGAAATCAGCCAGGATGTACAGTCGTGATTGGACAATGATGTTGGACGTGGGTTCATCAGATCCTCCTCATTGCAGCAGGCCTCTCAGAACCCTAGAACTCTTCCCTATAAAGAGCACCAGTCTCAAAGATGAGTGCAGCACATCCAAGCATTTCTCCAGCTCTACGACCACCAACTAA 609 0.4581 MSPAASTRWCPTPEQLMILEEMYRGGIRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKARDRQKLRRKLSRQQQQLQHHHHHHHQHLLHHFETSASSGLHHQHVPHYNSVQFLPQEGLQEATAQVMNYTWKVNISERDEMEKSARMYSRDWTMMLDVGSSDPPHCSRPLRTLELFPIKSTSLKDECSTSKHFSSSTTTN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01643 202 FunFam WUSCHEL-related homeobox 4 6 73 - -
Eupl01g01643 202 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Eupl01g01643 202 Pfam Homeodomain 6 66 IPR001356 GO:0003677
Eupl01g01643 202 Gene3D - 6 80 - -
Eupl01g01643 202 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 200 IPR044555 GO:0003700|GO:0099402
Eupl01g01643 202 MobiDBLite consensus disorder prediction 66 92 - -
Eupl01g01643 202 CDD homeodomain 7 67 IPR001356 GO:0003677
Eupl01g01643 202 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Eupl01g01643 202 SMART HOX_1 4 71 IPR001356 GO:0003677
Eupl01g01643 202 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01643 Eupl-Chr1 37853493 37854619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01643 1 188 Wox Gene Family AT2G28610 44.856 8.49e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl01g01643 Homeodomain 3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01643 - - nnu:104599216 218.009