Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01636 ATGGACCCATCCGATCACACTGCAAAACCACCCTTCCCAAGAGACTCCCGTGGCTCACTCGAAGTCTTCAACCCATCCACTTACGCCTCCAGATCCAACAACCCAACTTTCCGTCCACACTCCACGTGGCAGACCTGGGGTGAAACACGTAGTACTCCAGAACCAGAGGAACCCAAGCTCTCCAAGTCCGGTGGAACAGACGAGATCACCTCATGGATGGCTCTCAAGGATCCAATCCCACCACCACCGCCACTGTTCACCGAGAAGACAATCTCCACAATCATCAAGGACCAACCAGACAATCAGAAAAATTTCGAAAAACCGACGGCCGAGGTTCCACTATCGGGCGAAGCCGGCGCAGCCGCACAAAGAGCAGCCGAATGGGGACTAGTACTGAAGACTGACGTAGAGACGGGGAAGCCACAAGGTGTCGCAGTGAGGACGTCGGGAGGTGACGATGTGAATAAGGCCGGGACATCTAGAAGGAACTCGGGCAACTCGGTTCGTAGCTCGGAAGAATCAGATGGAGGTGCAGGGAAGGAGAGAGGGATCCCAAGAGTGTCTGAGGACATCAAGGACGCGTTATCGACATTTCAACAAACATTCGTGGTGTCGGATGCGACCAAGCCCGATTACCCTATCATGTATGCGAGTGCTGGGTTCTTTAAGATGACTGGTTACACCTCCAAAGAGGTCATTGGGAGGAACAGTCGGTTTCTCCAAGGCTCCGGAACGGATCCTCAAGAGATATCGAAGATAAGAGAAACGTTAGAAGCGGGGGCGAGCTATTGTGGACGGTTGTTGAATTACAAGAAGGACGGGACCCCCTTCTGGAATCTTCTCACCATTGCGCCCATCAAGGACGATACTGGGAAGGTTCTAAAGTTTATTGGGATGCAAGTGGAGGTTAGCAAACATACAGAGGGGGCTAAGGATAAGGCGGTCCGGCCCAATGGATTGCCAGAATCATTGATCCGATACGATGCTCGACAGAAGGAGATGGCCGCGAGTTCAGTCTCTGAGCTTGTGCTCGCAGTGAAGCAGCCTCGCGCACTTTCAGAATCAACAAACCGACCACCGTTCATGAGGAGATCGGAGGGTGGTGGAGGACAGGAAAGATCAGAAGCCCTGGGTAGAAGAAACTCGGAGAATGTGGCTCCTCCTAGACGGAATTCACATGGCGGTACGAGAATCTCAATGCAGCGAATAAACGAGTTGCCTGAAAAGAAACCAAGAAAATCCGGTCTACGCTCCTTTATGGGGCTTATAGGGAAAGGTCATTCGAATAATGTAGAAAACCACGATATGGACGACGTTTTGATGGTGGACGAAGAAAGTGAGGATGACGACGACGGGAGGCCCGACAGCGTTGACGACAAAGTAAGGCAAAAGGAAATGAGGCGGGGTATTGATCTTGCTACTACACTGGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGGTTGCCTGATAACCCCATTATATTCGCATCGGATAGCTTCTTGGAGTTGACAGAGTACAGTCGCGAAGAGATCTTGGGAAGAAACTGCAGGTTTCTCCAAGGCCCTGAAACTGATCCAGCAACAGTGAGAAAAATAAGACAAGCAATTGATAACCAGACAGATGTTACCGTGCAGCTCATAAATTACACAAAAAGCGGGAAAAAATTCTGGAATCTGTTCCATCTCCAGCCCATGCGTGACCAGAAGGGAGAAGTACAGTATTTTATTGGAGTACAACTTGATGGCAGTGAGCATGTTGAGCCACTTCAGAACAGTATTCCAGAGGATACAGCAAAAGAGAGTGCAAAACTGGTGAAAGAAACTGCAGAAAATGTTGACGACGCAGTGAGAGAACTTCCGGATGCTAATTTGAAACCAGAGGATCTATGGATCAATCATTCAAAGACTGTTCTGCCAAAGCCTCATAGGAAGGACAGCTCATCATGGAGAGCTATTCAAAAGATTCTAGAGAGTGGAGAACAGATTGGCCTAAAACATTTTAGGCCGGTAAAACCGTTGGGATCTGGCGACACCGGCAGTGTGCATCTGGTGGAGTTGTGTGGAACTGGAGAATACTTTGCAATGAAGGCTATGGATAAGGGTATAATGCTTAACCGCAACAAGGTACATAGAGCTTGTGCAGAAAGAGAAATTCTTGACCTGCTGGACCATCCTTTTCTTCCTGCGTTATATGCTTCTTTTCAGACCAAAACACATATATGTCTGATAACTGATTACTACCCTGGTGGAGAGCTCTTTCTGCTTTTGGACAGGCAACCTATGAAGGTCCTTAAGGAAGATGCTGTAAGATTCTATGCTGCAGAAGTAGTTGTTGCACTGGAGTACCTTCATTGTCAAGGTATAATTTACAGGGATTTGAAACCTGAAAATGTCCTACTCCAGGGCAATGGGCATGTGTCATTGACAGATTTTGATCTGTCATGTTTGACATCTTGCAAACCACAGCTTTTGATTCCAAATATCCTGGATAAGAAAAAGCAACAGAAACGCCAACTGCCTCCAATCTTTATGGCTGAACCTATGCGAGCATCGAATTCTTTTGTTGGAACTGAGGAGTACATAGCACCGGAAATTATCACTGGAGCTGGCCATACTAGTGCGGTTGACTGGTGGGCCCTTGGCATTCTTCTATATGAAATGCTTTATGGATATACACCATTTAGAGGAAAGACAAGGCAAAAGACATTTGCCAATATTCTTCACAAGGACCTTAAATTTCCAGGAAGTATTTCGGTAAGTCTCCACACAAGGCAGTTGATGTACCGGCTGTTGCACAGGGATCCCCAAAATAGATTGGGTTCACGTGAAGGAGCAAATGAAGTTAAGCAGCACCCATTCTTCCGGGGTGTCAATTGGGCTCTAGTTCGGTGCATGAACCCGCCTCAACTTGATGCTCCAACTGACACTGAAAAGGAAGTTGAAGTTGTAGATCCTGAACTTCTCGATCTACAAACAGATGTCTTCTAA 2994 0.4739 MDPSDHTAKPPFPRDSRGSLEVFNPSTYASRSNNPTFRPHSTWQTWGETRSTPEPEEPKLSKSGGTDEITSWMALKDPIPPPPPLFTEKTISTIIKDQPDNQKNFEKPTAEVPLSGEAGAAAQRAAEWGLVLKTDVETGKPQGVAVRTSGGDDVNKAGTSRRNSGNSVRSSEESDGGAGKERGIPRVSEDIKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNSRFLQGSGTDPQEISKIRETLEAGASYCGRLLNYKKDGTPFWNLLTIAPIKDDTGKVLKFIGMQVEVSKHTEGAKDKAVRPNGLPESLIRYDARQKEMAASSVSELVLAVKQPRALSESTNRPPFMRRSEGGGGQERSEALGRRNSENVAPPRRNSHGGTRISMQRINELPEKKPRKSGLRSFMGLIGKGHSNNVENHDMDDVLMVDEESEDDDDGRPDSVDDKVRQKEMRRGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRQAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHVEPLQNSIPEDTAKESAKLVKETAENVDDAVRELPDANLKPEDLWINHSKTVLPKPHRKDSSSWRAIQKILESGEQIGLKHFRPVKPLGSGDTGSVHLVELCGTGEYFAMKAMDKGIMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHICLITDYYPGGELFLLLDRQPMKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLIPNILDKKKQQKRQLPPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPGSISVSLHTRQLMYRLLHRDPQNRLGSREGANEVKQHPFFRGVNWALVRCMNPPQLDAPTDTEKEVEVVDPELLDLQTDVF* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01636 997 FunFam LOV domain-containing protein 668 752 - -
Eupl01g01636 997 SMART serkin_6 669 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01636 997 MobiDBLite consensus disorder prediction 1 118 - -
Eupl01g01636 997 SMART pas_2 470 539 IPR000014 -
Eupl01g01636 997 SMART pas_2 189 259 IPR000014 -
Eupl01g01636 997 Pfam Protein kinase domain 672 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01636 997 MobiDBLite consensus disorder prediction 385 399 - -
Eupl01g01636 997 MobiDBLite consensus disorder prediction 349 434 - -
Eupl01g01636 997 CDD PAS 214 303 IPR000014 -
Eupl01g01636 997 ProSiteProfiles Protein kinase domain profile. 669 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01636 997 ProSitePatterns Protein kinases ATP-binding region signature. 675 698 IPR017441 GO:0005524
Eupl01g01636 997 SMART pac_2 264 306 IPR001610 -
Eupl01g01636 997 SMART pac_2 545 587 IPR001610 -
Eupl01g01636 997 PANTHER FLIPPASE KINASE 1-RELATED 157 977 - -
Eupl01g01636 997 ProSiteProfiles PAS repeat profile. 187 258 IPR000014 -
Eupl01g01636 997 ProSiteProfiles PAS repeat profile. 468 541 IPR000014 -
Eupl01g01636 997 FunFam LOV domain-containing protein 457 621 - -
Eupl01g01636 997 SUPERFAMILY PYP-like sensor domain (PAS domain) 484 583 IPR035965 -
Eupl01g01636 997 FunFam Putative LOV domain-containing protein 201 357 - -
Eupl01g01636 997 ProSiteProfiles PAC domain profile. 542 596 IPR000700 -
Eupl01g01636 997 FunFam Putative LOV domain-containing protein 753 968 - -
Eupl01g01636 997 Gene3D PAS domain 201 358 - -
Eupl01g01636 997 MobiDBLite consensus disorder prediction 141 185 - -
Eupl01g01636 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Eupl01g01636 997 Gene3D Phosphorylase Kinase; domain 1 668 978 - -
Eupl01g01636 997 CDD PAS 483 583 IPR000014 -
Eupl01g01636 997 Gene3D PAS domain 456 621 - -
Eupl01g01636 997 SUPERFAMILY Protein kinase-like (PK-like) 645 975 IPR011009 -
Eupl01g01636 997 MobiDBLite consensus disorder prediction 20 51 - -
Eupl01g01636 997 ProSiteProfiles PAC domain profile. 261 315 IPR000700 -
Eupl01g01636 997 CDD STKc_phototropin_like 667 977 - -
Eupl01g01636 997 Gene3D Transferase(Phosphotransferase) domain 1 753 971 - -
Eupl01g01636 997 MobiDBLite consensus disorder prediction 153 173 - -
Eupl01g01636 997 SUPERFAMILY PYP-like sensor domain (PAS domain) 208 300 IPR035965 -
Eupl01g01636 997 Pfam PAS domain 491 583 IPR000014 -
Eupl01g01636 997 Pfam PAS domain 208 304 IPR000014 -
Eupl01g01636 997 NCBIfam PAS domain S-box protein 493 588 IPR000014 -
Eupl01g01636 997 NCBIfam PAS domain S-box protein 214 307 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01636 Eupl-Chr1 37786068 37803770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01636 1 997 AGC Kinase Gene Family AT3G45780 72.754 0.0 1419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl01g01636 Pkinase 2.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01636 K20715 - vvi:100262213 1589.7