Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01623 ATGGGTTGGTTACCCTGCTCTGGAAAACCAAACAAGAAAGTGAAGAAGAAGAATCCTGACGATCGGCACCACCCCATCTCCTATGAGAATTTGAAGGTAAATCCATCGTTGCATGTGGAGAGCTCCAAGGATGGAGGGTTTGATCACATTTCGGCTCAGACATTTGCCTTTCGTGATTTGGCAGCTGCAACAAAAAACTTCAGGGAAGATTGTCTTGTGGGGGAGGGAGGTTTTGGTAGAGTTTATAAAGGACGATTAGATAGTACTAACCAGATTGTGGCTATCAAGCAACTCGATCGTAATGGGTTGCAAGGAAACCGAGAGTTCCTTGTTGAAGTCTTGATGTTGAGTCTACTTCACCACTCTAACCTTGTTAATCTAATCGGGTATTGTGCTGATGGAGATCAGAGACTTTTGGTCTACGAGTACATGTCTTTAGGATCTTTGGAAGACCATCTACACAACCTTCTGCCTGATAAGAAACGACTTGACTGGAACACGAGAATGAAAATAGCAGCTGGTGCAGCGAAGGGCTTGGAGTATTTGCATGACCAGGCAAATCCCCCTGTTATATACCGTGATTTGAAATGCTCAAACATTTTGCTTGGGGAGGGGTATCATGCCAAGCTGTCCGATTTTGGCTTGGCCAAATTGGGTCCTGTTGGGGATAGGACCCATGTCTCCACCAGAGTGATGGGCACATATGGCTATTGTGCACCAGAGTATGCAATGACTGGTCAGCTGACACTGAAATCAGATGTTTATAGCTTTGGTGTTGTTCTTTTAGAAATCATAACAGGCAGGAAAGCAATTGACAGTTCGAAAGCTGCACCAGAGCACAATTTGGTTGCATGGGCACGACCCTTATTCAAAGATCGGAGGAAATTCTTACAGATGGCTGATCCAATGCTCCAGGGGCAGTATCCTATGAAGGGTATGTACCAAGCACTTGCTGTTGCTGCAATGTGTGTTCAGGAGCAGCCCACCATACGGCCCCCAATAGCAGACGTGGTCACAGCTTTGTCTTATCTTGCCTCACAAACATACAGCACTGAAAACCAGCCAGTCCAAAGCTCCCATATGGCCACCTCTGCTCGAACAAAAAGGAACAATGATAGGCGACTTGATGGTGGTAGTGAATCTGTGAGATCAAACCAGGGGGGATTAAACTGA 1173 0.4595 MGWLPCSGKPNKKVKKKNPDDRHHPISYENLKVNPSLHVESSKDGGFDHISAQTFAFRDLAAATKNFREDCLVGEGGFGRVYKGRLDSTNQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHSNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHNLLPDKKRLDWNTRMKIAAGAAKGLEYLHDQANPPVIYRDLKCSNILLGEGYHAKLSDFGLAKLGPVGDRTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDSSKAAPEHNLVAWARPLFKDRRKFLQMADPMLQGQYPMKGMYQALAVAAMCVQEQPTIRPPIADVVTALSYLASQTYSTENQPVQSSHMATSARTKRNNDRRLDGGSESVRSNQGGLN* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01623 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Eupl01g01623 390 SUPERFAMILY Protein kinase-like (PK-like) 53 345 IPR011009 -
Eupl01g01623 390 CDD STKc_IRAK 73 341 - -
Eupl01g01623 390 FunFam Serine/threonine-protein kinase PBS1 40 143 - -
Eupl01g01623 390 FunFam Serine/threonine-protein kinase PBS1 144 359 - -
Eupl01g01623 390 Gene3D Phosphorylase Kinase; domain 1 37 143 - -
Eupl01g01623 390 MobiDBLite consensus disorder prediction 352 390 - -
Eupl01g01623 390 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Eupl01g01623 390 SMART serkin_6 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01623 390 Pfam Protein tyrosine and serine/threonine kinase 72 340 IPR001245 GO:0004672|GO:0006468
Eupl01g01623 390 MobiDBLite consensus disorder prediction 1 27 - -
Eupl01g01623 390 PANTHER OS07G0668900 PROTEIN 29 354 - -
Eupl01g01623 390 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01623 390 Gene3D Transferase(Phosphotransferase) domain 1 144 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01623 Eupl-Chr1 37603007 37607522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01623 34 346 Glycoside Hydrolase AT3G07070 68.868 1.04e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl01g01623 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01623 - - nnu:104599331 612.453