Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01622 ATGGAAGTTAAAGATGCGGAGAGGATGGTTATAGCCAAACCTGTTGCTTCACGACCTTCTTGTTCCAGTTTCCGGTCCTTCTCTGAGCTCCTTGCAGGTGCCATTAATGCCTCGCCCCCTAGTACATTTTCTGAAACAGCTGTAGCTGCCATTAGACCCAAGACAGTGAGGTTTAAGCCAGTGGTGAATCAGGCTCCGGTTGGGGTTGTTTCATCCCAGGGTGAAATATCTGGAACAGCAGTATGTTATTCATCTGACAAGGTTTTGAGATCAGACAGCAAATCTACTGTAGTATACAAACCCTTGGCAAAGCTTGTTTCAAGGACAACTGCTTCTCTCTTGACAAATCTGGGAAACTTCGATATTAGTCATCAACAGGCACTAGCACAGGTGCAGGCCCGGGTTCAGCATCCAGACCTACCAAAACACCGAATCCAAACGCAGCCGACTTCAAATCTTCATCGGGACTTGCCATCACAAGTTGAAACAAGCCAGACAATTGAGCCCTCAAAGTTGGCATCACAAAACCTGGAAGAGAATCAGAGAGCTCTACTGCATGCGGCGGACCGACCTTCTTATGATGGATATAATTGGAGAAAGTATGGGCAAAAGCAAGTGAAAGGAAGTGAGTACCCGCGAAGTTATTATAAGTGCACACACCCAAATTGTCCCGTGAAGAAGAAGGTTGAGAGATCATTTGATGGACAGATAACAGAAATTGTCTACAAGGGCGAGCACAATCATCCAAAGCCTCAGCCTCCTAAACGCCAATTGCCAGGGGCACAAGGGCAAGTATTTGTGTCTGATGGGACTGATCAAGAAAATGGAAATCCATTACTCCGTAACCCTCTCAGTGAGAGGAATGAAGGATCTGAAGGTAGAATTGAGAATCAGAAAGTACGATTATCCGTACAGCCTACTTATCCAGGCAAAAATCTAACTCCTTACGATCCTGTTACGGCGCGAACATTTAATAGTGGTGTTGGAACACCGGATAATTCTTGTGGTCTTAGTGGGGATTGTGAGGAAGGAAGCAGGGGAGTGGATGCAGAGGATGATGAACCTAAATGTAAGCGAAGGAAGAATGATCATCAATCCAACGAAGTAGGCTTACTAGGGCAAGGTGTACAAGAGCCTCAATCGGTGTTGCAAAGTTCCACAGATTCTGAGATTTTGGGGGATGGTTTTCGCTGGCGAAAATATGGGCAAAAGGTCGTGAAAGGAAATCCACATCCCAGAAGTTACTACAGATGCACCAGTCTCAAGTGCAATGTGCGCAAGCATGTGGAAAGGGCATTGGATGATCCCAGAGCTTTTATCACAACGTACGAGGGAAAACATAATCATGACATGCCAGTTACTAGGAGCCTGAATCCTGTTGCTTCCGACCCAGATTCACTAGCTCCGACTAACAAAGCCAAGCAATAA 1428 0.4587 MEVKDAERMVIAKPVASRPSCSSFRSFSELLAGAINASPPSTFSETAVAAIRPKTVRFKPVVNQAPVGVVSSQGEISGTAVCYSSDKVLRSDSKSTVVYKPLAKLVSRTTASLLTNLGNFDISHQQALAQVQARVQHPDLPKHRIQTQPTSNLHRDLPSQVETSQTIEPSKLASQNLEENQRALLHAADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQITEIVYKGEHNHPKPQPPKRQLPGAQGQVFVSDGTDQENGNPLLRNPLSERNEGSEGRIENQKVRLSVQPTYPGKNLTPYDPVTARTFNSGVGTPDNSCGLSGDCEEGSRGVDAEDDEPKCKRRKNDHQSNEVGLLGQGVQEPQSVLQSSTDSEILGDGFRWRKYGQKVVKGNPHPRSYYRCTSLKCNVRKHVERALDDPRAFITTYEGKHNHDMPVTRSLNPVASDPDSLAPTNKAKQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01622 475 MobiDBLite consensus disorder prediction 459 475 - -
Eupl01g01622 475 MobiDBLite consensus disorder prediction 264 284 - -
Eupl01g01622 475 MobiDBLite consensus disorder prediction 367 388 - -
Eupl01g01622 475 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 SMART WRKY_cls 392 451 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 MobiDBLite consensus disorder prediction 349 366 - -
Eupl01g01622 475 ProSiteProfiles WRKY domain profile. 387 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 120 457 IPR044810 GO:0003700
Eupl01g01622 475 MobiDBLite consensus disorder prediction 244 316 - -
Eupl01g01622 475 Pfam WRKY DNA -binding domain 194 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 Pfam WRKY DNA -binding domain 394 449 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 MobiDBLite consensus disorder prediction 447 475 - -
Eupl01g01622 475 MobiDBLite consensus disorder prediction 328 388 - -
Eupl01g01622 475 MobiDBLite consensus disorder prediction 143 166 - -
Eupl01g01622 475 SUPERFAMILY WRKY DNA-binding domain 387 452 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 FunFam WRKY transcription factor 179 252 - -
Eupl01g01622 475 Gene3D WRKY domain 181 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 Gene3D WRKY domain 377 453 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 ProSiteProfiles WRKY domain profile. 187 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01622 475 FunFam WRKY transcription factor 380 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01622 Eupl-Chr1 37595605 37598629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01622 384 452 WRKY Transcription Factor Family AT2G37260 50.725 1.87e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl01g01622 WRKY 2.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01622 - - msin:131253141 683.33