Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01619 ATGGGTAGTGTTCCAGTGAACACTGCTGGTGCTGGGAACAAAGGGTTGGCGGAAGTAAATTACCACATGCGGGATGTGCACAAGGAAGTTAGGGACGGAGTTGTGGGGGAGGGACAAGGTCTCTCGGAGGAAGATGAATCTCGGATTAACGAGGTCACTGAAGATGTAAACAATGGACACGGAGGGGCTGCCCAGGCCCAGGCTGGTCTGCAGAAACAGCAGCAACAATCTCAAGGGCCAGTGGTTCGTTGGGAAAGGTTTCTCCCTCTTAGGTCGCTGAAGGTTTTGCTGGTGGAAAACGATGATTCAACACGTCATGTTGTCAGTGCTCTTCTTCGTAATTGTGGTTATGAAGTTACTGCTACTGCAAATGGGCTAGAAGCATGGAAAATCTTACAAGATTTGACCAATCACATTGATCTCATCTTAACTGAGGTCGTCATGCCTTGTGTATCCGGCATTGGTCTTCTATGCAAGATTATGAGCCACAAAACTTGCAAGAATATTCCTGTGATAATGATGTCATCACACGATTCTATGGGTATTGTCTTTAAGTGTCTGTCAAAGGGTGCAGTTGACTTTCTGGTGAAGCCTATTCGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAGATGCCACAGCTCTAGTGGTAGTGGGAGTGAAAGTGGTATACAGACTCAAAAATCTGTGAAGTCAAAGAGTTTTGAAGAGTCTGACAACAATACTGGCAGCAGTAACGAGGATGATAATGGGAGTGTTGGTTTGAATCTCAGGGATGGAAGCGACAATGGAAGTGGCACTCAGAGCTCCTGGACAAAACGGGCAGTAGAAGTTGACAGTCCCCAGCCAGGGTCGCACTGGGATCAATTAACTGGTCCTACTGATAGCACCTGTGCACAAGTTATCCATTCAAAGTCTGAAGCATTCGGCAATGAATGTGTGCCTACGATTGCAGCGAAGGAGTGCCAGGAACAGGATGAAAAACTTCTCGACAATGTTGCAGCAGGAAAGGACTTGGAGATTGGAGTACCTAGAATTCGAGATTTACGACATGAATATTCAGGCAAGAATGTATCTACCAACCTAACAGGCACAAAACAGGATAAGTTGCCTGGACTAGACAACGAGAAAGACAACGAGCAATTAGATAAAGGGCTGCTGGAACTCAACAGTGAGAAGCCTATTGGCAAACTGAGGGCCCAAGCTGCTGATCTCATCGGTTCAATTGCTAATAGTACCAATCTCCAAGTAGAAACCGCAGTAAAAGATAAGGCCACTTCTGACACTAAAGAGCTACCATCCCTTGAGCTGAGTTTAAAAAGGCTGAGAGGAGTTGGATATGTAGGGGCCACCACTCATGATGACCGCAACATTTTGAGACGTTCTGACCTTTCTGCCTTCTCCAGGTACAATACTGCCTCTATTGCTAATCAGGCTCCTACTGGAAACGTAGGAAGCTGTTCTCCACTTGATAATAGTTCAGAAGCAGTGAAGACAGAATCGATGCACAATTTTCCATCTAATTCAAAGAGCACTCCTCCCAATCAGCGGTCCAATGGGAGTAGCAGCAACAATGACATGGGCTCCACCACCAAAAATATTTTTACCAAGCCAGTGCCCTTTAATGAGAAGTCAGCATCAACAGCCCAATGCCTGCATCCCTCTTCCTTCCAACCTGTGCAGAGCGGCCGTACATGTCCACCTCAGGAAGTGAAAACCGACAAGACCAATGATGTAGCAGTTAACATGGTGTTGACACAATCAAGAGGGGCACATCAACCGGTCCAAGTCCACAACCACCATCACCACTACCACCACCACCACCACCACGTCCATAAGATGCAGCAACAGCAGCCATCACCAGACCATGATGATCTCTCATTGAAGAACATGGCAGTATCAGCTACACAATGTGGGTCATCCAATGTTATTGGCGGGCCCATTGAAGGTAATCCTAGAAACTACAGCTTAAACAGGAGCGCCTCGGGCAGTAACCATGGAAGCAACTGGCAGAATGGAAGCAGTACTGCTGCTAACACCAGAGGGACGGACATCGAAAGTGATAATGGTGTTGCTGGACAAAGTGGAGTCTGTGGCGGTAGTGGAAACGGGAGCGGAGTGGATACAAACCGGTTCACAAGGGAGGCCGCCTTGACCAAATTCCGTCAGAAGAGGAAAGAGAGATGCTTCGAAAAGAAGGTTCGATACCAAAGTAGGAAGAAGCTGGCAGAGCAGCGACCACGGGTTCGTGGGCAGTTTGTGCGACATATAGTGTACGAGCACACAAGCAGGGACACAAATAGCTAA 2316 0.4732 MGSVPVNTAGAGNKGLAEVNYHMRDVHKEVRDGVVGEGQGLSEEDESRINEVTEDVNNGHGGAAQAQAGLQKQQQQSQGPVVRWERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTATANGLEAWKILQDLTNHIDLILTEVVMPCVSGIGLLCKIMSHKTCKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKSVKSKSFEESDNNTGSSNEDDNGSVGLNLRDGSDNGSGTQSSWTKRAVEVDSPQPGSHWDQLTGPTDSTCAQVIHSKSEAFGNECVPTIAAKECQEQDEKLLDNVAAGKDLEIGVPRIRDLRHEYSGKNVSTNLTGTKQDKLPGLDNEKDNEQLDKGLLELNSEKPIGKLRAQAADLIGSIANSTNLQVETAVKDKATSDTKELPSLELSLKRLRGVGYVGATTHDDRNILRRSDLSAFSRYNTASIANQAPTGNVGSCSPLDNSSEAVKTESMHNFPSNSKSTPPNQRSNGSSSNNDMGSTTKNIFTKPVPFNEKSASTAQCLHPSSFQPVQSGRTCPPQEVKTDKTNDVAVNMVLTQSRGAHQPVQVHNHHHHYHHHHHHVHKMQQQQPSPDHDDLSLKNMAVSATQCGSSNVIGGPIEGNPRNYSLNRSASGSNHGSNWQNGSSTAANTRGTDIESDNGVAGQSGVCGGSGNGSGVDTNRFTREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRHIVYEHTSRDTNS* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01619 771 PANTHER TWO-COMPONENT RESPONSE REGULATOR 93 412 IPR045279 GO:0009736
Eupl01g01619 771 MobiDBLite consensus disorder prediction 361 381 - -
Eupl01g01619 771 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Eupl01g01619 771 MobiDBLite consensus disorder prediction 656 714 - -
Eupl01g01619 771 Pfam CCT motif 717 758 IPR010402 GO:0005515
Eupl01g01619 771 FunFam Two-component response regulator-like PRR37 93 251 - -
Eupl01g01619 771 MobiDBLite consensus disorder prediction 603 629 - -
Eupl01g01619 771 MobiDBLite consensus disorder prediction 603 617 - -
Eupl01g01619 771 SUPERFAMILY CheY-like 91 217 IPR011006 -
Eupl01g01619 771 SMART REC_2 93 208 IPR001789 GO:0000160
Eupl01g01619 771 ProSiteProfiles CCT domain profile. 717 759 IPR010402 GO:0005515
Eupl01g01619 771 MobiDBLite consensus disorder prediction 57 77 - -
Eupl01g01619 771 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Eupl01g01619 771 Gene3D - 92 245 - -
Eupl01g01619 771 MobiDBLite consensus disorder prediction 480 540 - -
Eupl01g01619 771 MobiDBLite consensus disorder prediction 641 714 - -
Eupl01g01619 771 MobiDBLite consensus disorder prediction 217 274 - -
Eupl01g01619 771 CDD psREC_PRR 95 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01619 Eupl-Chr1 37569177 37579199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01619 169 758 Response Regulator Gene Family AT5G02810 48.701 1.66e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Eupl01g01619 Response_reg 1.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01619 K12129 - ming:122086227 1037.33