Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01613 ATGCCTCCGAAGCAGCAGTCGAAAGCCGATCAAGCGAAGAAGCAGAAGGTGGTTGAAGATAAGACCTTTGGACTGAAGAACAAAAACAAGAGCAAAAATGTCCAGAAGTACGTCCAGAGTATCCACCAATCCGCACAACCCAAGCCCGACCCTTCGAAGGTCGCCGCCAAGAAAAAGAAAGAGGAGGAGAAGGCGAGAGAGAAGGAATTGAGTGATTTGTTTAAGATTGCTGTTAGTCAGCCGAAAGTTCCACCCGGTGTCGATCCCAAGTCTATATTATGCGAATTTTTCAAAGCGGGGCAATGTACCAAGGGTTTCAAGTGCAAGTTCTCACACGATTTGAATGTCCAGAGAAAGGGTGAAAAGATTGATATTTACAGTGATAAGCGTGATGAAGAAACAATGGAGGATTGGGATCAAGAGATGCTGGAGAAGGTCGTGGAGTCGAAGAAGATGGAGTATAACCAGAATAAACCAACGGAGATTGTTTGTAAACACTTTTTGGAAGCAGTGGAGAAGAAACAATACGGTTGGTTCTGGGTTTGTCCAAATGGTGGTAAAGAGTGCCACTACAGACATGCTCTTCCTCCAGGATATGTGTTAAAATCTCAAATGAAGGCCTTGTTGGATGAAGAGACTGAGAAGATTTCTATTGAGGAAGAGATTGAAAATCAGCGTGCAAAAGTGGCGACTACAACCCCAATGACTCCCGACCTTTTCATGCAATGGAAGAAGAAAAAGATGGAAGAAAGAGATGCTGGACTTGCTGCACAACGGGCGGATAGGGCTAAAAATGATCGCATGAGTGGTCGTGAGCTGTTTCTGTCAGATGCTAGCTTGTTCGTGGATGATGCTGAGGCATATGACAAGTACCAAAGAGAAGAAGAACCTGATGCTACTGAACAGAAGACCAAGGACCATTCTGCTGCTGAGGGTCCAAGTACCTCAACAACTGTAGTTAATGATGCGGAAGAAGTGCTTCCTGACGACGACGACGACGACGACGACGACGACGATGAGATGATGAACTGGACATGGACGAGTTAA 1047 0.4546 MPPKQQSKADQAKKQKVVEDKTFGLKNKNKSKNVQKYVQSIHQSAQPKPDPSKVAAKKKKEEEKAREKELSDLFKIAVSQPKVPPGVDPKSILCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQEMLEKVVESKKMEYNQNKPTEIVCKHFLEAVEKKQYGWFWVCPNGGKECHYRHALPPGYVLKSQMKALLDEETEKISIEEEIENQRAKVATTTPMTPDLFMQWKKKKMEERDAGLAAQRADRAKNDRMSGRELFLSDASLFVDDAEAYDKYQREEEPDATEQKTKDHSAAEGPSTSTTVVNDAEEVLPDDDDDDDDDDDEMMNWTWTS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01613 348 MobiDBLite consensus disorder prediction 287 348 - -
Eupl01g01613 348 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Eupl01g01613 348 Gene3D - 88 203 - -
Eupl01g01613 348 Gene3D - 204 279 - -
Eupl01g01613 348 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 339 - -
Eupl01g01613 348 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Eupl01g01613 348 MobiDBLite consensus disorder prediction 9 27 - -
Eupl01g01613 348 Pfam DRG Family Regulatory Proteins, Tma46 215 300 IPR032378 -
Eupl01g01613 348 MobiDBLite consensus disorder prediction 1 68 - -
Eupl01g01613 348 MobiDBLite consensus disorder prediction 324 342 - -
Eupl01g01613 348 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Eupl01g01613 348 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Eupl01g01613 348 SUPERFAMILY CCCH zinc finger 88 113 IPR036855 GO:0046872
Eupl01g01613 348 Coils Coil 208 228 - -
Eupl01g01613 348 MobiDBLite consensus disorder prediction 287 308 - -
Eupl01g01613 348 MobiDBLite consensus disorder prediction 52 68 - -
Eupl01g01613 348 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01613 Eupl-Chr1 37486311 37499642 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl01g01613 DFRP_C 2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01613 - - msin:131253151 541.191