Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01605 ATGCAAGGAGCTACTGCTGCAACTGATTCAGCGATGGCCGACGTTCATCAGAACACCAACGCTGCTCACTTATCCGATTTCCAGGCCTTTCCGACACACGATGGCCGATTCGTCGAATACAACATCTTTGGTAATCTGTTCGAGATCACATCTAAGTATCGGCCTCCAATAATGCCCATCGGACGAGGCGCCTATGGAATCGTTTGTTCGATATTGAATTCGGAGACGAACGAGATGGTTGCAATTAAGAAGATAGCTAATGCGTTCGATAATCACATGGATGCGAAACGAACGCTTCGAGAGATTAAACTTCTTCGGCATTTAGATCATGAGAATGTCGTAGGTTTAAGAGATGTCATCCCACCACCTATACGAAGAGCATTTTCTGATGTCTATATTGCCACAGAACTCATGGACACCGATCTTCACCAAATAATTCGCTCTAATCAAGGTTTATCAGAGGAGCACTGTCAGTACTTTCTGTATCAGATCCTTCGTGGGCTGAAATACATACATTCTGCAAATGTTATTCATAGAGATTTGAAACCCAGCAACCTCTTGCTGAATGCAAATTGTGATTTGAAGATCTGTGATTTCGGTCTTGCTCGCCCAACTTCAGAGAATGATTTTATGACTGAATATGTTGTCACCAGATGGTACAGGGCACCTGAATTGTTGCTAAACTCTACGGATTACACAGCTGCAATTGATGTGTGGTCTGTGGGCTGCATCTTTATGGAACTGATGAATAGGAAACCATTATTTGCGGGTAGAGATCATGTGCATCAGATGCGTTTACTAACAGAGCTTCTTGGCACACCCAGTGAGGCTGAGCTTGGATTTGTTCAGAATGAAGATGCAAAAAGGTATATCCGGCAACTACCAAAACATCCTCGCAAGCCTTTTGCGAATGAATTTCAACATGTTCATCCGGATGCCATTGATCTTGTGGAGAGAATGTTGACATTTGATCCCACCAAAAGAATTACAGTTGAAGAAGCTCTGGCTCATCCTTATTTAGCAAAACTACACGACATAGCCGATGAACCAGTGTGCCTGGAGCCCTTCTCCTTTGAATTTGAGCAACAGGCCTTAATGGAAGAGCAGATGAAGGAGATGATATATAAGGAAGCCGTAGCACTCAATCCTGAATATGCATATTGGTAA 1167 0.4319 MQGATAATDSAMADVHQNTNAAHLSDFQAFPTHDGRFVEYNIFGNLFEITSKYRPPIMPIGRGAYGIVCSILNSETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVVGLRDVIPPPIRRAFSDVYIATELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENDFMTEYVVTRWYRAPELLLNSTDYTAAIDVWSVGCIFMELMNRKPLFAGRDHVHQMRLLTELLGTPSEAELGFVQNEDAKRYIRQLPKHPRKPFANEFQHVHPDAIDLVERMLTFDPTKRITVEEALAHPYLAKLHDIADEPVCLEPFSFEFEQQALMEEQMKEMIYKEAVALNPEYAYW* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01605 388 ProSiteProfiles Protein kinase domain profile. 54 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01605 388 Gene3D Transferase(Phosphotransferase) domain 1 138 367 - -
Eupl01g01605 388 CDD STKc_TEY_MAPK 47 383 - -
Eupl01g01605 388 Pfam Protein kinase domain 59 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01605 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Eupl01g01605 388 SUPERFAMILY Protein kinase-like (PK-like) 59 348 IPR011009 -
Eupl01g01605 388 FunFam Mitogen-activated protein kinase 39 148 - -
Eupl01g01605 388 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 52 341 - -
Eupl01g01605 388 SMART serkin_6 54 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01605 388 ProSitePatterns MAP kinase signature. 89 192 IPR003527 GO:0004707|GO:0005524|GO:0006468
Eupl01g01605 388 ProSitePatterns Protein kinases ATP-binding region signature. 60 84 IPR017441 GO:0005524
Eupl01g01605 388 FunFam Mitogen-activated protein kinase 138 367 - -
Eupl01g01605 388 Gene3D Phosphorylase Kinase; domain 1 37 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01605 Eupl-Chr1 37234341 37240286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01605 18 386 MAP Kinase Gene Family AT3G45640 81.843 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Eupl01g01605 Pkinase 2.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01605 K20536 - nnu:104599347 709.138