Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01604 ATGAAGACGAGGCTTCTCTTCTTGCTTTTTCTCTCTTTTCTTCTCTTCATCAACTCCACCAAAGCTCAGAAGTCCGGTTTTGTAAGCTTGGACTGTGGAGGTAAGGAGAACTTCACAGATGATCTGGGACTTGAGTGGACTGCCGACAATCAATTTATATACGGTGAAACAGCTAATATTTCGGTTGCAAATGAGACTCGAAAGCAATATATGACACTGCGATACTTCCCTGCAAATAACAGGAAATATTGTTACATGCTTGATGTCAAAACTAGAACTCGAAACCTTGTAAGAACAACCTTCTTATATGGGAACTTTGACAACAATAATGTCTATCCAAAGTTTGACATCTCGCTTGGGGCTACTCATTGGTCGACAATTGTCATTTCAGATGCTAGTACCATAGAGGTCCGAGAGTTGATCTTTTTGGCTACCTCACCTACAATTAGTGTGTGTTTATCCAATGCTACAACTGGGCAGCCATTTATCTCAACCCTCGAGCTTCGTCAATTTAATGGCTCAGTTTATTATACAGAACATGAAACTCAGTTCTTTCTGAGCGTGTCTGCAAGAATAAACTTTGGTGCAGAGAGTGAAGATCCTGTCAGATACCCAGATGATCCGTTTGATAGAATATGGGAGTCTGATTCTTTGAAGAAGGCAAATTACCTTGTTGATGTTGCTGCGGGAACTGAGAAGGTGTCAACCCAAATGGCTATTGATGTTAACAGAGATGAAATACCACCTGAAAAAGTGATGCAGACAGCTGTGGTTGGTGGAAAGGGATCATTAACTTACCGGTTGAACTTGGATGGTTTTCCAGGTTTTGGATGGGCATTCTCATACTTTGCTGAAATTGAAGATTTAAGTCCAAATGAGACCAGGAAATTCAGGTTTATCCTCCCAGGCATGCCTGACGTCAGCAAAGCTGCTGTTAATATTGAAGAAAATGCTCAAGGAAAATATCGGTTGTATGAACCAGGATTCACCAACATATCACTCCCTTTTGTATTAAATTTTGGATTTGGAAAAACATCTGACTCATCCAAGGGACCTCTCTTGAATGCTATAGAGATAAATAAGTACCTGGAGATAAGCGATGGTTCTCTAGATGGAATGGTTATTGCTAGTCTAGTTTCACACTACCTGTTAGCAGATTGGGCACGAGAAGGTGGTGACCCATGTTTGCCCGTTCCATGGTCATGGCTGCAATGTAACTCGGATCCACTACCAAGGATAGTCTCAATTATTTTGTCTGGGAAGAATTTGACAGGGAATATTCCTTCAGAGTTGACAAACTTGCCGGGCTTAGTTGAGCTATGGCTTGATGGTAACTCTCTCACTGGTCCGATACCTGATTTTAGTGGATGCACAAACTTGAAAATCATTCACCTTGAAAACAATCGTTTGACTGGTGAGCTGCCTTCGTCTTTGATGGACCTACAAAATTTGAGGGAACTGTACTTGCAGAACAATATGCTATCTGGAACAGTTCCGTCTGGTCTTATCAACAAAAATCTGGTTTTGAACTACTCTGGAAACATCAATCTTCACAAAGGAGGGGGTAGAGGGAACCACATGAGCATCATTATTGGCTCATCAGTTGGGGCTGCTGTTCTGCTTATAGCTACTATTGCATCTTGCTTATTTCTACAGAGGGGAAAAAAGGGGTACTCTGAGGAAGATGAGCTTAGAAGTGCCTTGCCTCCTCAGAGGGTAGTTTCTTCCTTGCGTGAATCTGCCGCAGAAACTGCATACTGTTTTGCATTATCTGACGTTGAAGATGCCACCAGGAATTTTGAAAAGAAAATTGGTTCTGGGGGCTTTGGGGTCGTTTACTATGGTAAGATGAAAGATGGAAAGGAAATTGCAGTCAAAGTTTTAACAAGTAATTCCTACCAGGGAAAGAGAGAATTTTCAAATGAGGTTACCTTGCTTTCCAGAATACATCATAAAAATCTGGTACAATTTCTTGGATACTGCCAAGAAGAAGGGAAAAGTGTCCTTGTTTATGAGTTCATGCATAATGGAACCCTCAAGGAACATCTTTATGGACCTTTAACACGGGAGGGAAGTATCAGTTGGATCAAGCGTCTTGAGATTGCCGAAGATGCTGCGAAAGGGATTGAGTACCTTCATACAGGCTGTGTTCCAACCATCATCCATAGGGATCTGAAAAGCAGCAATATCCTTCTTGACAAACACATGAGAGCAAAGGTCTCAGATTTTGGTCTCTCAAAGTTTGCAATAGATGGAGCCACCCACGTGTCGAGCATAGTTCGGGGGACTGTTGGGTATCTTGACCCTGAGTATTATATCTCTCAGCAATTAACAGACAAGAGTGATGTATATAGTTTTGGTGTCATTCTTCTCGAGCTGATTTCAGGTCAGGAGGCGATATCAAATGAAAACTTTGGCGTTAACTGCCGTAACATAGTCCAATGGGCAAAGTTACACATTGAGAGTGGGGACATTCAGGGAATTATCGACCCCTCACTGCAGAATGAATTCGAGATCCAGTCAGTGTGGAAGATTGCTGAGAAAGCGATGATGTGTGTCCAACCCCATGGTAGTATGAGGCCTTCGATATCAGAAGTGCTCAAGGAGATCCAAGATGCAATCTTGATTGAGAGGGGAGCAGAGGCGGCAAGGGAAGGTAACTCCGATGATATGTCGAGGAATTCTGTACACTCTTCTATCAACTTGGGCACCCTGGACTTGGGTGTAATTGAGCCATACGTTTCGTTCAGTGAGTCCATTGCACTGCCAACGGCCCGATAA 2781 0.4257 MKTRLLFLLFLSFLLFINSTKAQKSGFVSLDCGGKENFTDDLGLEWTADNQFIYGETANISVANETRKQYMTLRYFPANNRKYCYMLDVKTRTRNLVRTTFLYGNFDNNNVYPKFDISLGATHWSTIVISDASTIEVRELIFLATSPTISVCLSNATTGQPFISTLELRQFNGSVYYTEHETQFFLSVSARINFGAESEDPVRYPDDPFDRIWESDSLKKANYLVDVAAGTEKVSTQMAIDVNRDEIPPEKVMQTAVVGGKGSLTYRLNLDGFPGFGWAFSYFAEIEDLSPNETRKFRFILPGMPDVSKAAVNIEENAQGKYRLYEPGFTNISLPFVLNFGFGKTSDSSKGPLLNAIEINKYLEISDGSLDGMVIASLVSHYLLADWAREGGDPCLPVPWSWLQCNSDPLPRIVSIILSGKNLTGNIPSELTNLPGLVELWLDGNSLTGPIPDFSGCTNLKIIHLENNRLTGELPSSLMDLQNLRELYLQNNMLSGTVPSGLINKNLVLNYSGNINLHKGGGRGNHMSIIIGSSVGAAVLLIATIASCLFLQRGKKGYSEEDELRSALPPQRVVSSLRESAAETAYCFALSDVEDATRNFEKKIGSGGFGVVYYGKMKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHKNLVQFLGYCQEEGKSVLVYEFMHNGTLKEHLYGPLTREGSISWIKRLEIAEDAAKGIEYLHTGCVPTIIHRDLKSSNILLDKHMRAKVSDFGLSKFAIDGATHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNENFGVNCRNIVQWAKLHIESGDIQGIIDPSLQNEFEIQSVWKIAEKAMMCVQPHGSMRPSISEVLKEIQDAILIERGAEAAREGNSDDMSRNSVHSSINLGTLDLGVIEPYVSFSESIALPTAR* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01604 926 ProSiteProfiles Protein kinase domain profile. 598 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01604 926 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Eupl01g01604 926 SMART serkin_6 598 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01604 926 Gene3D Transferase(Phosphotransferase) domain 1 674 892 - -
Eupl01g01604 926 FunFam Leucine-rich repeat receptor-like protein kinase 576 673 - -
Eupl01g01604 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Eupl01g01604 926 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Eupl01g01604 926 Pfam Protein tyrosine and serine/threonine kinase 600 815 IPR001245 GO:0004672|GO:0006468
Eupl01g01604 926 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 674 883 - -
Eupl01g01604 926 PANTHER OS07G0107800 PROTEIN-RELATED 454 874 - -
Eupl01g01604 926 SUPERFAMILY L domain-like 398 508 - -
Eupl01g01604 926 CDD STKc_IRAK 604 871 - -
Eupl01g01604 926 FunFam Leucine-rich repeat protein kinase family protein 372 521 - -
Eupl01g01604 926 Pfam Malectin-like domain 30 360 IPR024788 -
Eupl01g01604 926 SUPERFAMILY Protein kinase-like (PK-like) 585 868 IPR011009 -
Eupl01g01604 926 Gene3D Phosphorylase Kinase; domain 1 573 673 - -
Eupl01g01604 926 Gene3D Ribonuclease Inhibitor 375 523 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01604 Eupl-Chr1 37197970 37226630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01604 19 708 Receptor kinase-like Gene Family AT2G37050 68.822 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl01g01604 Malectin_like 1.4e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01604 - - nnu:104594742 1548.87