Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01603 ATGGCGGACGCTCCGGCAAGTCCCGGCGGTAGCCACGAGAGCGGCGACCAGAGTCCTCGCTCGAACGTTCGTGAGCAGGATAGATACCTCCCGATCGCGAATATCAGCCGGATCATGAAGAAAGCGCTTCCGGCCAACGGCAAGATCGCTAAGGACGCGAAAGAAACTGTGCAGGAATGCGTCTCGGAGTTCATAAGTTTCATAACTAGCGAGGCGAGCGATAAATGCCAGAGAGAGAAGAGGAAGACAATAAACGGTGATGATCTGTTGTGGGCTATGGCGACGTTAGGGTTTGAAGAATATATTGATCCGCTCAAGGTGTACCTGAATAGGTACAGAGAGATGGAGGGTGACACCAAGGGATCCGTAAAGGGTGGAGATGGATCTGCTAAAAAAGATGCAGGTTCAAATCCCCAGGTGGAGTTGTGTGGTGGGGGTCGCAGATTGCACGAGGGAGGTGGGATGGGGGAGAGACGAGAGCAAAAGAGAGCATTCGTGGGTTGTAATCAAGATCAAAGCAACGCTCTCCGGGTTGTGTATTTTGAAGTTGTTCTTTGGCACAGGCGCAGGCACAGCATCTTATGGTTCCCATGCAAGGCACCGAATAGTTCTCTTAGGAACGGTGGATTACCCTTGAGGTTGTTGAAGATTGAACCTTCGAAGTGA 666 0.515 MADAPASPGGSHESGDQSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLNRYREMEGDTKGSVKGGDGSAKKDAGSNPQVELCGGGRRLHEGGGMGERREQKRAFVGCNQDQSNALRVVYFEVVLWHRRRHSILWFPCKAPNSSLRNGGLPLRLLKIEPSK* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01603 221 Gene3D Histone, subunit A 16 164 IPR009072 GO:0046982
Eupl01g01603 221 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Eupl01g01603 221 SUPERFAMILY Histone-fold 26 131 IPR009072 GO:0046982
Eupl01g01603 221 FunFam Nuclear transcription factor Y subunit B-3 18 141 - -
Eupl01g01603 221 MobiDBLite consensus disorder prediction 1 27 - -
Eupl01g01603 221 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Eupl01g01603 221 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Eupl01g01603 221 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Eupl01g01603 221 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Eupl01g01603 221 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 145 IPR027113 GO:0001228|GO:0006355|GO:0016602
Eupl01g01603 221 MobiDBLite consensus disorder prediction 118 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01603 Eupl-Chr1 37181807 37193884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01603 1 137 CCAAT-HAP3 Transcription Factor Family AT2G37060 83.099 4.39e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Eupl01g01603 CBFD_NFYB_HMF 1.9e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01603 K08065 - psom:113320957 247.669