Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01600 ATGAAGTTCTTCGACAACTTGGCCACCATGGATCTCATGCGTTCAGAGAAGATGACCTTCGTTCAACTCATAATCCCCGTCGAATCTGCTCACAGAGCCGTCTCTTACCTCGGCGAACTCGGTCTTCTCCAGTTCAAAGACTTAAATGATGATAAAAGCCCTTTTCAGCGAACATTTGTTAATCAGGTAAAGCGATGTGGGGAGATGTCACGGAAGCTGCGGTATTTTAAAGATCAAATCGGCAAGGCCGGTCTATTATCTTCTGCTCGTCCAGGCTTGCAGCCGGATATTGAGTTGGAGGAATTAGAGATACAACTTGCTGATCATGAAGTAGACCTTATTGAAATGAATGCAAATAGTGAGAAACTGCGACAAACTTACAATGAGCTCCTGGAATTCAAGCTGGTGCTGCAAAAGGCAGGTGGCTTCCTTGTTTCAGCTCAGAGCCATGCAGTTGCACAGGAGAGAGAATTAGACGAAAATGTATATTCAAAGGACAACTTTGTGGAGAGAGCGTCGTTGCTTGAACAGGAATTGCAGTCTGGGCCTTCAAACCAAGCTGGCTTGAGATTTATTAGTGGGATTATTTGTAAATCTAAAGCTCTAGGGTTTGAGAGGATGCTATTCCGTGCTACAAGAGGCAATTCGTTTTTTAATCAGGCACCAGCTGAGGAGCAAGTCATGGATCCCGTATCAACTGAAATGGTTGAGAAAACTGTCTTCGTAGTGTTCTTTTCAGGGGAGCGGGCAAAAACTAAAATACTGAAAATTTGTGAGGCATTTGGCGCAAATTGCTACCCTGTTCCTGAAGATATAACCAAACAGAGGCAAATAACTCGAGAGGTTTTATCGCGTCTCTCAGAACTGGATGCCACTCTGGCTGCTGGGATCCGTCACCGAAATAAAGCCCTTTCGGAAATTGGATTTTACTTGACGAACTGGACAATTAGGGTAAGAAAGGAGAAAGCTGTATATGATACGTTGAATATGCTCAATTTTGATGTGACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCGATATTTGCAAAACCTCAGATTCAGGAGGCATTGCAACGTGCGACAATTGATAGCAATACACAAGTGGGAATAATATTTCATGTGATGGATGCTGTGGAATCACCACCTACATATTTTAGAACCAACTGTTTCACTAATGCATTTCAGGAAATTGTTGATGCATATGGTGTTGCTAGATACCAAGAAGCAAATCCTGCAGTTTATACTGTTATTACATTTCCGTTCCTTTTTGCTGTCATGTTCGGGGACTGGGGTCATGGAATATGCCTGTTATTGGGAGCATTAATTCTAATAGCTCGTGAGAGCAAACTTGGTTCGCAGAAACTCGGCAGCTTTATGGAGATGGCATTTGGCGGGCGCTATGTAATCCTTTTAATGGCATTGTTTTCGATCTATTGCGGGTTGATTTACAATGAATTCTTCTCTGTTCCTTATCGTATATTTGGTGAGACCGCTTACAAATGTCGGGATACTACGTGCAGTGATTCACATACAACTGGTCTAGTCAAATACCGTGATCCATACCCATTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTTCAGAGCTACCTTTCCTGAACTCCCTCAAAATGAAGATGTCTATTTTGTTAGGTGTGACTCAGATGAACGTAGGGATCTTATTAAGTTACTTCAACGCAAGGTTCTTTGGCAGCTCATTAGATATAAGGTATCAGTTTGTACCACAGATGATTTTTCTTAACAGCCTCTTCGGCTATCTTGCACTCCTCATTGTCATCAAGTGGTGCACAGGGTCTCAAGCTGACCTCTATCACGTGATGATTTATATGTTCTTGAGTCCCACTGAGGATCTTGGTGAGAATCAATTGTTTTGGGGGCAGAAACCTCTGCAGATCTTGTTGTTGCTTTTGGCAATTGTTGCAGTTCCTTGGATGCTCTTTCCGAAACCTTTCATTTTGAGGAAGCTTCATTCAGAGAGATTTCAAGGTCGTACCTATGGCATCCTTGGCACCTCTGAGATGGATCTCGACGTGGAACCCGACTCAGCACGGCAACATCATGAGGAGTTCGATTTTAGTGAGGTCTTTGTGCATCAAATGATACATTCCATTGAGTTTGTTCTAGGTGCAGTTTCAAATACTGCATCGTACCTTCGGCTCTGGGCTCTAAGCTTGGCCCACTCGGAGTTGTCAACCGTTTTCTACGAGAAAATCCTCCTACTTTCCTGGGGGTTCGACAACATTGCCATCCGGTTGGTGGGGCTTGCGGTTTTCGTCTTTGCCACAGCCTTCGTATTACTAATGATGGAGACTCTCAGTGCTCTTCTCCACGCATTGCGTCTTCATTGGGTGGAATTCCAAAGCAAGTTCTACTATGGTGACGGCTACAAGTTCAGACCCTTCTCCTTTGCCTCCTTGGCTGATGAGGAAGATTGA 2457 0.4396 MKFFDNLATMDLMRSEKMTFVQLIIPVESAHRAVSYLGELGLLQFKDLNDDKSPFQRTFVNQVKRCGEMSRKLRYFKDQIGKAGLLSSARPGLQPDIELEELEIQLADHEVDLIEMNANSEKLRQTYNELLEFKLVLQKAGGFLVSAQSHAVAQERELDENVYSKDNFVERASLLEQELQSGPSNQAGLRFISGIICKSKALGFERMLFRATRGNSFFNQAPAEEQVMDPVSTEMVEKTVFVVFFSGERAKTKILKICEAFGANCYPVPEDITKQRQITREVLSRLSELDATLAAGIRHRNKALSEIGFYLTNWTIRVRKEKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKPQIQEALQRATIDSNTQVGIIFHVMDAVESPPTYFRTNCFTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALILIARESKLGSQKLGSFMEMAFGGRYVILLMALFSIYCGLIYNEFFSVPYRIFGETAYKCRDTTCSDSHTTGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVTQMNVGILLSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLALLIVIKWCTGSQADLYHVMIYMFLSPTEDLGENQLFWGQKPLQILLLLLAIVAVPWMLFPKPFILRKLHSERFQGRTYGILGTSEMDLDVEPDSARQHHEEFDFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKILLLSWGFDNIAIRLVGLAVFVFATAFVLLMMETLSALLHALRLHWVEFQSKFYYGDGYKFRPFSFASLADEED* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01600 818 Coils Coil 99 126 - -
Eupl01g01600 818 PANTHER VACUOLAR PROTON ATPASES 12 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Eupl01g01600 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
Eupl01g01600 818 Pfam V-type ATPase 116kDa subunit family 36 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01600 Eupl-Chr1 37136917 37157063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01600 2 811 Primary Pumps ATPases(2) AT2G28520 79.705 0.0 1351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01600 K02154 - vvi:100250193 1429.85