Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01589 ATGGACTGCTCAAGTGACACTTCAGCCGCCGCCACCACCACCACCACCACAACGCTCTCTCTTTCCCCCTCATCTTCTCCTTCTCAGTCTTCTCTCCCTCCAACTCTTCCTCCAGTTGTCGTCACACCTTGTGCCGCTTGTAAGATTCTCCGTCGACGATGCGCTGAGAAATGCGTCCTGGCGCCGTACTTCCCACCGACGGAACCACTCAAGTTCACAACTGCCCATAGAGTGTTTGGTGCAAGCAACATCATCAAGTTGTTACAGGAACTTCCAGAGTCTCAAAGGGCTGATGCAGTGAGTAGCATGGTTTACGAGGCGAATTCGAGGATTAGAGATCCAATTTATGGGTGTGCAGGAACAATTTGCCAACTCCAAAAACAAGTGAACGAGCTCCAGACACAACTGGCTAAGTCCCAGGCTGAGCTTCTCAATATGCAATGCCAACAAGCAAACCTAGTCGCCTTAATTTGCATGGAGATGGCGCATTCTCAAGAACCCTCGTCTCAACAATCCGTCGACAACTTCTTGAACAATCCCCACAATTTGCAGACTAATGGAAGCTTCTTAGACGACACCAATCTCGGCTCAGCGTGGGAACCGCTCTGGACATGA 615 0.5041 MDCSSDTSAAATTTTTTTLSLSPSSSPSQSSLPPTLPPVVVTPCAACKILRRRCAEKCVLAPYFPPTEPLKFTTAHRVFGASNIIKLLQELPESQRADAVSSMVYEANSRIRDPIYGCAGTICQLQKQVNELQTQLAKSQAELLNMQCQQANLVALICMEMAHSQEPSSQQSVDNFLNNPHNLQTNGSFLDDTNLGSAWEPLWT* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01589 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 42 172 - -
Eupl01g01589 204 MobiDBLite consensus disorder prediction 1 29 - -
Eupl01g01589 204 Pfam Lateral organ boundaries (LOB) domain 43 140 IPR004883 -
Eupl01g01589 204 Coils Coil 129 149 - -
Eupl01g01589 204 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
Eupl01g01589 204 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01589 Eupl-Chr1 36977526 36979373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01589 39 204 AS2 family AT1G07900 62.130 1.09e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl01g01589 LOB 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01589 - - nnu:104594766 288.885