Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01582 ATGGGGAAGAAAGGGAACTGGTTTGTTGCAGTAAAGAGAGCTTTCAGTCATGAATCCAAGGAGAAGAATGATCAGAAACCCAGTAAGTCGAAGAAGAAATGGGGGTTCGGAAAAAAGAAACACCGGGATCCCTCATCTTCGACGGTAGAAACTTTCTCAGCACCACTTCCTCCCCCTTCTGAGGAGGTGAAACTGACTGAAGCAGAGAATGAACAGAGCAAGCATGCTTACTCTGTAGCGCTCGCCACTGCTGTGGCTGCTGAGGCCGCTGTTGCTGCTGCTCAGGCTGCTGCCGAGGTTGTTCGCCTCACTACTGTGACACGGTATTCAGGTAAATCAAAGGAGGAAGTTGCGGCAATCAAAATTCAAACTGCATTCCGAGGATACCTGGCAAGGAGGGCATTGCGAGCTTTGAGAGGGCTGGTTAGGTTGAAAACACTGATACATGGGCATTCTGTCAAACGTCAAGCCACAACCACACTACGGTGCATGCAGACCTTGGCTCGTGTGCAGTCCCAAATCCGTGCAAGGAGGATCAGAATGTCGGAGGAGAACCAGGCACTCCAGCGGCAGCTCCAGCAGAAGCGTGAGAAGGAGCTCGAGAACTTGAGAGCATCCATGGGAGAGGATTGGGATGACAGCCTGCAATCCAAGGAGCAAATTGAAGCAAATCTATTGGGCAAGCACGAGGCTGCTATGAGAAGAGAAAGAGCACTGGCTTATGCATTCTCTCATCAGCAAATGTGGAAGAATTCTTCAAAGTCTGCAAACCCAATGTTTGTGGACCCAAATAATCCCCAATGGGGATGGAGTTGGTTAGAGCGATGGATGGCAGCCCGGCCGTGGGAGAGTCGAAGCATGTCGGAGAAAGAACTCAACAATGACCGCTCATCTGTAAAGAGCGCAAGCCGCAGCATTGCAGGTGGAGAAATCAGCAAAGCTTACGCTCGCCGTGATCTCAATGCCGAGAGGCCTTCCCCGACAGCCCAAAAGCTAAGCCGCCCGGCCAGCCGCCAGTCCCCGTCAACTCCCCCCTCCAAGGCGGCATCTTCATCATCAGTAGCTGGGAAAGTGAAGTCAGCAAGCCCACGTAGAGGCTTCCGGGTCGTAGATGACGATTCTAGGAGCATGCTTAGCATGCAGTCAGAGCAGTATCGACGGCACAGTATTGCTGGGTCATCGGTGAGGGACGATGAGAGCCTTGCGAGCTCCCCAGCAGTTCCAAGCTACATGGCTCCCACTGAGTCCGCAAGGGCCAAGGCCCGACCCCAGAGTCCATTGGGGATTGAGAAGCACGAAACACCAGAGAGGGGATCGGCAGGGTCCGTAAAGAAGCGGTTATCCTTTCCAGCTTCCCCAGCTGGACCAAGGCGACATTCAGGCCCACCCAAGATAGACAGCAGCTCCATTAAGGACATTGGTGTGCACATAGAAAACAGTGTGAGCAATGGAGGGAGCAGGTAG 1464 0.5314 MGKKGNWFVAVKRAFSHESKEKNDQKPSKSKKKWGFGKKKHRDPSSSTVETFSAPLPPPSEEVKLTEAENEQSKHAYSVALATAVAAEAAVAAAQAAAEVVRLTTVTRYSGKSKEEVAAIKIQTAFRGYLARRALRALRGLVRLKTLIHGHSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKREKELENLRASMGEDWDDSLQSKEQIEANLLGKHEAAMRRERALAYAFSHQQMWKNSSKSANPMFVDPNNPQWGWSWLERWMAARPWESRSMSEKELNNDRSSVKSASRSIAGGEISKAYARRDLNAERPSPTAQKLSRPASRQSPSTPPSKAASSSSVAGKVKSASPRRGFRVVDDDSRSMLSMQSEQYRRHSIAGSSVRDDESLASSPAVPSYMAPTESARAKARPQSPLGIEKHETPERGSAGSVKKRLSFPASPAGPRRHSGPPKIDSSSIKDIGVHIENSVSNGGSR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01582 487 MobiDBLite consensus disorder prediction 14 31 - -
Eupl01g01582 487 MobiDBLite consensus disorder prediction 425 440 - -
Eupl01g01582 487 MobiDBLite consensus disorder prediction 375 389 - -
Eupl01g01582 487 PANTHER IQ-DOMAIN 5-RELATED 1 464 - -
Eupl01g01582 487 SMART iq_5 114 136 IPR000048 GO:0005515
Eupl01g01582 487 Gene3D iswi atpase 112 150 - -
Eupl01g01582 487 MobiDBLite consensus disorder prediction 326 358 - -
Eupl01g01582 487 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Eupl01g01582 487 MobiDBLite consensus disorder prediction 473 487 - -
Eupl01g01582 487 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Eupl01g01582 487 MobiDBLite consensus disorder prediction 285 487 - -
Eupl01g01582 487 Pfam Protein of unknown function (DUF4005) 402 457 IPR025064 -
Eupl01g01582 487 Coils Coil 178 201 - -
Eupl01g01582 487 MobiDBLite consensus disorder prediction 14 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01582 Eupl-Chr1 36897665 36902781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01582 1 479 IQD Protein Family AT5G03040 51.329 1.80e-147 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01582 - - nnu:104588644 674.855