Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01578 ATGGCGGACGAATCTGATAAGGTCCCCCCATCGTTCAAGAATATGGGTAATATGATGAAGGATGTGGAGGCAAAAGGGTTCAATCCAGCGTTGATAGTCCTGCTTGTCGTGGTCGGACTACTGCTGATCTTCCTTGTTGGGAATTACGTTCTCTACATGTATGCTCAGAAAACCCTTCCACCAAGGAAGAAGAAGCCCGTCTCCAAGAAGAAGATGAAGAAGGAGAGGCTGAAGCAAGGCGTCTCAGCACCAGGAGAGTAG 261 0.4866 MADESDKVPPSFKNMGNMMKDVEAKGFNPALIVLLVVVGLLLIFLVGNYVLYMYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01578 86 MobiDBLite consensus disorder prediction 60 86 - -
Eupl01g01578 86 PANTHER DNA-BINDING PROTEIN S1FA2 5 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Eupl01g01578 86 MobiDBLite consensus disorder prediction 62 76 - -
Eupl01g01578 86 Pfam DNA binding protein S1FA 22 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01578 Eupl-Chr1 36856789 36862145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Eupl01g01578 S1FA 5.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01578 - - ming:122057570 130.568