Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01561 ATGTCGAAGTTTTCCGGCTTAATCTTCCTTTCCCTGCTCCTCTTGTTGGTTTTTTCTTGTAATGGTGTTAACGGCGAAACGACTGAGTTCGACTTCGGGACGTTAACTCTCAATAGTTTGAAGCTCATCGGAGATGCCCATTTGAATAACGGAAGTGTACGGTTATCTCGTGACCTCCCTGTCCCTAATTCCGGAGCAGGGAGGGTGTTGTACAGTGAGCCCGTCAGATTTCGGCTGCCGGGAAGTCATTTACCGGCGTCTTTCTCGACATTCTTTTCGTTTTCAGTTATGAATCTCAATCCATCTTCGATTGGTGGTGGACTTGCTTTTGTCATCTCACCTGACGATCAGACGGTTGGAGATGGTGGTGGGTTTCTCGGGCTGGTTAATGGGAAGGGTTCTCTGTCTGGCTTCGTTGCTGTTGAGTTTGATACTTTGATGGATGTGGAGTTCAAAGACATTAATGGGAACCATGTGGGTGTGGATCTGAACAGCTTGGTTTCTACTGAGGTCGGTGATTTGGGTGCGGTAGAGGTCGAGCTCAGAAGCGGAGATCTCGTGAATGCTTGGATCGACTACGACGGGTCGACTCGAGTGTTTAATGTCTCTGTTTCATACTCGAATCTCCGCCCAAGCGATCCCCTTTTGTCCTTTAATCTCGACTTGGATCGGTTCGTGAACGATTTCATGTTTGTGGGGTTTTCCGGGTCGACCCAGGGGAGTACAGAGATCCACAGTATCGAATGGTGGAGTTTTAGTTCCTCATTCAATGAATTTTCGCCTCCGCCACCTCCAACGGCTAATTCTGCCAACCCACCACCTCCTTCCTCAGCTCCTTCTGGTTCCATTTCAGGGATCCAAAATAATGTAAAGATCAATAGATCCTCATCTTGCCATAACCAGCTCTGTAAACAAGGACCCGTGGCGGTAGCAGGGGTTGTAACAGCTGGAGCTTTTTTTCTTGCTGTTTTTGCTTGTCTTCTCATCTGGTTATTCTCCAAAAAGTTCAAATCTCCCAAGAAATCCGAGTCTCTAACGTCGGATGTCATAAAAACCCCTAAAGAATTCAGTTACAGAGAACTCAAATCAGCCACGAGGTGCTTTGATTCAGCGAGAGTTATAGGCCACGGAGCATTCGGTACCGTTTACAAAGGTATAATTCCAGAAACAGGAGCTATGATCGCTGTGAAGAAATGTAGCCATAGTGGTGGTCAGGGAAAGGCCGAATTTTTATCGGAGCTTTCGATAATTGGAACTCTCAGGCATCGGAACCTTGTCCGTCTCCAAGGATGGTGCCATGAAAAGGGCGAAATTCTACTAGTCTATGACTTCATGCCGAATGGAAGCCTTGATAAGGCTTTATTCGAAGTGAAAATTCCCTTACCATGGCACCACCGGCGAAAAATTCTAATGGGGGTTGCTTCAGCTCTGGCCTACTTGCATCAAGAATGCGAAAACCAGGTAATTCACAGAGATGTCAAGGCTAGCAATATAATGCTAGATGAAAGCTTCAATGCCCGATTGGGTGATTTCGGTTTGGCGAGGCAAATCGAGCACGATAAATCGCCCGACGCGACTGTGACGGCCGGAACAATGGGTTACTTAGCCCCTGAGTATCTGCTAACAGGAAGAGCAACTGAGAAGACTGACGTGTTTAGCTTTGGAGCTGTGGTTCTTGAAGTGGCTAGTGGGAGGAGACCAATTGAGAAAGAGACTAGTGGGGTTGGAGGTGTCGGGGTTAGTAGTAATTTGGTTGAATGGGTGTGGGGTTTGCATAGAGAAGGGAGGTTACTAGGGGCTGCTGATGGGAAACTTGAAGGTGAGTTTGATGAGGGAGATATGAGGAGAGTGCTTTTGATTGGGCTAGCTTGCTCACACCCTGATCCATTGGCTAGGCCTACAATGAGAATTGTGATTCAGATGCTTGTGGGTGAGGCTGAAGTTCCAATTGTCCCAAGAACAAAGCCTTCTATGAGTTTCAGCACCACCCATCTCTTGTTGAGTCTGCAAGACAGTGTTTCTGATTGTAATGGGATGATCACCATCTCCCCTTCCTCCTCATCAAACAACAGCTTCAATGGTGGTGAACAAGTGTGA 2097 0.4716 MSKFSGLIFLSLLLLLVFSCNGVNGETTEFDFGTLTLNSLKLIGDAHLNNGSVRLSRDLPVPNSGAGRVLYSEPVRFRLPGSHLPASFSTFFSFSVMNLNPSSIGGGLAFVISPDDQTVGDGGGFLGLVNGKGSLSGFVAVEFDTLMDVEFKDINGNHVGVDLNSLVSTEVGDLGAVEVELRSGDLVNAWIDYDGSTRVFNVSVSYSNLRPSDPLLSFNLDLDRFVNDFMFVGFSGSTQGSTEIHSIEWWSFSSSFNEFSPPPPPTANSANPPPPSSAPSGSISGIQNNVKINRSSSCHNQLCKQGPVAVAGVVTAGAFFLAVFACLLIWLFSKKFKSPKKSESLTSDVIKTPKEFSYRELKSATRCFDSARVIGHGAFGTVYKGIIPETGAMIAVKKCSHSGGQGKAEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDFMPNGSLDKALFEVKIPLPWHHRRKILMGVASALAYLHQECENQVIHRDVKASNIMLDESFNARLGDFGLARQIEHDKSPDATVTAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETSGVGGVGVSSNLVEWVWGLHREGRLLGAADGKLEGEFDEGDMRRVLLIGLACSHPDPLARPTMRIVIQMLVGEAEVPIVPRTKPSMSFSTTHLLLSLQDSVSDCNGMITISPSSSSNNSFNGGEQV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01561 698 SMART serkin_6 368 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01561 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 258 IPR013320 -
Eupl01g01561 698 CDD STKc_IRAK 374 642 - -
Eupl01g01561 698 PANTHER - 50 652 - -
Eupl01g01561 698 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Eupl01g01561 698 Gene3D Phosphorylase Kinase; domain 1 353 444 - -
Eupl01g01561 698 ProSiteProfiles Protein kinase domain profile. 368 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01561 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Eupl01g01561 698 Gene3D - 26 261 - -
Eupl01g01561 698 FunFam L-type lectin-domain containing receptor kinase VIII.1 26 266 - -
Eupl01g01561 698 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Eupl01g01561 698 FunFam L-type lectin-domain containing receptor kinase VIII.1 445 660 - -
Eupl01g01561 698 ProSitePatterns Protein kinases ATP-binding region signature. 374 398 IPR017441 GO:0005524
Eupl01g01561 698 CDD lectin_legume_LecRK_Arcelin_ConA 28 250 IPR001220 GO:0030246
Eupl01g01561 698 SUPERFAMILY Protein kinase-like (PK-like) 350 676 IPR011009 -
Eupl01g01561 698 Pfam Protein kinase domain 370 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01561 698 FunFam L-type lectin-domain containing receptor kinase VIII.1 332 444 - -
Eupl01g01561 698 Pfam Legume lectin domain 29 257 IPR001220 GO:0030246
Eupl01g01561 698 MobiDBLite consensus disorder prediction 260 279 - -
Eupl01g01561 698 MobiDBLite consensus disorder prediction 260 284 - -
Eupl01g01561 698 Gene3D Transferase(Phosphotransferase) domain 1 445 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01561 Eupl-Chr1 36660206 36662831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01561 8 677 Receptor kinase-like Gene Family AT3G53380 68.321 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl01g01561 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01561 - - nnu:104594806 1038.87