Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01560 ATGCCGCCGGAACCCTTGCCTTGTGATCGGAAGGATTTCTTCAAGGAGAAGAAGCACGAGAGGTCGGATGCCCTAGGTTCTATTGTGAGATGGAGGGATTCCAATCACGGACCCCGCGAGTTCGCGCGTTGGGGACCGGAAGAGTGTCAACGCAGGCCTCCAGGTCATGGTAAGCAGGGCGGTTATCAGCTATTCTCTGATGAATCCGTTCATGGATCCATGCCATCTCGGTCCAGTGAGAGGATGGTGGAAGATGAGAGCTGCCGACCTGCTGCTTCCCGTGGAGAGGGAAAATATGGCAGGAACAACAGGGAAAACAAAGGATCTTTCAGCCAGAAGGACGGGAAGGGGCATCCCTGGGAGGCTGTCGATGCCTCTGTTACCTCATCAGTCAGGCAGCACGATATGAGTGCTCAGAGGTCAGTCAGTGATCTGCTAATATATCCATCTAACCCGCATTCTGACATTGAACACTCGTCATGCAATCAACTTCACTCCAAAGATCACCATGATAAGATGGGAAGTGTCGATGGCTTGGGCACAGGCCACAGATATGATAAAGAACACTCACTGGGCTCAATCGCTTGGAAGCCTCTGAAGTGGACCCGTTCCAGCAGCTTGTCATCGCGTGGGTCTGGTTTCAGCCATTCAAGTAGCTCAAGGAGCATGAGAGCCGATTCCGATGAAACTAGGCCTGATTTACCATCCGGTAAAGTGACTCCAGTTCAATCCCCCTCTGGGGATGCTGCTGGGGGTGCAACATCCGCTGCATCATTTGAAGAGACGTGCCCCAGGAAGAAACAGCGCCTTGGATGGGGTCAGGGGCTGGCGAAGTACGAGAAGGCGAAGGTTGAGGGCCCTGACGAGAATGTCATCAAGAATGGATTGGTCCTGTATGCTACTACCATAAGTACCACTAGCGTCTCTGCAAGTTTGCCTGATAAAAGCCCTAGAGTCACAGGCCTATCAGAATGTGCATCTCCTGCAACTCCCTCTTCCGTTGCTTGTAGTTCATCACCAGGTCTGGAGGACAAATCTCATATCAAGGCAGCAAATAATGATAATGATACAAGTAATTTAAGTGGTTCACCAGGTCGTGGATTTCAGAATTGCCTCGAGGAATTCTCTGTTAATCTAGAGCATTTAGAGCTCAATCCAATCACTAACTTGAGCTCTCTGCTAATTGATTTGCTACAACCGGAGGATGCTAATTCTGGGGATTCTAGTTTTGTGAGATCTACTGCAACAAATAAGTTGCTTCTAATAAAGAGTGATATTTTGAAAGCAGTGGAGGAAACTGAATGTGAAATTGATTTGTTGGAAAATGAACTCAAGCGTTTGAATTCTGAACTTGAAACCAGTGGTCCTCATGCAACGACATCCGATTTTCTAGAAGTGCAGTGTGCATCAAAAGCTTGTGAAGAAGTAGGTCCTGTCTCCAAAGTATTCCACAAACCTGCTCCCTTGCAACTAGTTTCTTCAGGCAATATGCTTGTGGAGAAGCCAGTTTTGTGTATGGATACATTTGAAGAAGTCCGTGCTGAAGTTAAAGATGATGATATTGATAGTCCGGGAACTGCTACATCGAAAATTTTGGAGCCATTATCCATGAAAGCAGTCTCTGCATCAGATATGGTGAAACATGGTCATTCTGCAGATTTTGAGGCAACTAGGTCAACGTCTCCTGAAGAGCAATGTTCTGTGCCTCCTGTTGATGAGAAAAAGTCAGCAAGTTTATCTGGTTCTAGAGATGGGAATCCCCTAAATCAAAGCGGTATTACTTCTCGTGTCTCCAGTGGTTTGAACATACGTAGTGATGCAGAATGTAAATTAAATGTTTCGATCCTGGCATCCAATAGGGATTCTGCAAGAAGAGCATCTGAAATTTTTACTAAATTATTACCAACTGATCAACCTCCAATTGATATTTGGGGAACCATCAGTGTCTCATGCCGGCAAAACACTTCACTTGTTAAAGAAAAGCTTGCGATGCGGAAGTGTTTTCAAAGATTCAAGGAGCGAGTTCTTACTCTCAAGTTTAGGACATTTCAATATTTGTGGAAGGAAGATATGCGTCTACTTTCTATAAGGAAGTATCGGGCAAAGTCACAGAAACGGTTTGAATTAAGTTCAAGAACATTGCCCAATGGGCAACAGAAACATCGTTCCTCTATCCGCTCGCGGTTTGCCTCACATGCAGGTGATTTGATCTTTGTTCCTACCACTGAAGTAGTAGATTTTACCAGCAAGCTGCTGTCAGATTCCCAGATTAAGCATTACAGGGATAATCTGAAGATGCCTGCTTTAATATTAGACGAGAAGGAAAAGAAGCTGTCAATGTTTGTTACAAGTAATGGATTAATTGAAGATCCCTGTGCTGTTGAGAAGGAAAGGGTGATGATCAACCCATGGACTCCTAAAGAGAAGGAAATTTTCATGGATATGCTAGCAACATTTGGAAAGGACTTCAAAAAAATTTCTAATTTTCTTGACCACAAAACAACGGCTGATTGCATTGAGTTCTACTACAAGAACCATAAATCAGAAAGCTTCGAGAAAATAAAGAAAAAATTGGAGATCAGAAAGCAAGGACGAAACTTCCCCACCAATACATACCTGGTGACATCGGGCAAAAAGTGGAACCGAGAGGTGAACGCTGCTTCCCTTGATCTGTTGGGGACAGCTGCAGCTCATGCTGATGACAGAGTGAAGACTCAGCAGACTTGTGTGCGGAGGTCATATTTGAGAGGTGATTATAACCATAAAACACCCTGTTCTGGTGATGCCGTGTTTGAAAGGTCAACCAGTGTTGATATTCTTGGGAATGAGAGAGAAGCTGCAGCTGCAGATGTTTTGGCTGGTATTTGTGGTGCTCTATCTTCAGAGGCAATGAGCTCTTGTGTTACGAGTTCCATTGACCCTGGGGAGGGTTGTCAGGAGTGGAAGTGCCAGAAGAGGACCTCTGCATCGGATAGGCCCTTGACACCCGAGGTTATGCAGAACATTGATGATGAGGAAACTTGTTCAGATGAGAGCTGTGGGGAATTGGATTCTGTGGATTGGACAGATGAGGAGAAGTCCATTTTTATCCAGGCCTTGAGATCTTGTGGCAAGGATTTTGCTAAGATCTCTCGATGTGTCAGGACAAGGTCGAGGGACCAATGCAAGATCTTCTTCAGTAAGGCACGGAAGTCTCTTGGTCTGGATGAGATCCATCCTGGTTCAGGCAATGAAGTTACACCGTTGAGCGACGCTAATGGAGGAAGGAGCGATCCTGAAGATGCTTGTGTTGTGGAAATGGAATCAGCAATCTGCAGTACTCAATCCTGTTCCAAGATGGATGTGGATTTGCCATCAACTGTGACAGACACTAACTGCGAATTATCAGGGCATGCAGTAACCACTCACCTCCAAACTGAACCTGACAAATCAGGGGAAAGGAATGGGATAGAGGGGTTGGATTGTGATGATGCTGAGACTATGATAGAAACTATGGTTTTGGATGACTGTCAGGCAGGTGTCAAACCTGTGTTGCTTTGTGATGGTGACAACAATTTGGTGAATGGAGTCGAAGGAAAGTTTGGTGCTACACATGAGGTTTCGAAGTGCGATGATGCAGTAGTGGCAGATGCCACATTGAGTTGTGACCTGCCTGTGCGACATCATGAAAATACAGATTTGACTGCTGATGGTGAAGCTGCAAAAGAGCAAGGAACTTGCCAGACAGTTACCCCAGCTGAAGAATCTGCATGTGCTGGAGGACCAACCGGACTTGGCCAGTCTAGGTCAAATGCTGCAGTTGAGCTCAAGGCCATATCTGGTGCTTCTGCTGAGGGGCTTAAGACTGAATCAGAGCAATTGCATTTTTTGGTGCCTGAAAGTGGGCCCAATGACGGAGGGGATGCAAAGACTGGTGCAGATTCAAATAGAAGAAGTAGCTCATGTTTCTTTGTACCAGATTCAAATTCAAACAGAAATGCTTCCCACCTGGAAGGTGAGACTAGTGTTCGCCCGGGCTTCAGTTTGACCCCCAGCTACCAGCATCAGATATCCCGAGAATTTCTTCCCTCTGTACAGAAGTCCCAGATCATCTCGTGGCAGCAGAAGGAGAATTGCCCTACTGTGCCTGCAAATTTGGTTGTACGAGATTCTTCTGCGATCCATTATGAGGACCGTCTTAGGCAGACTCAACAACCATCATCTGCACTTAATTCTGAGGAGACTGGCAACAGAGAGCATCAGAATACTGCAAGTAGAGATGTTTATCAGCAGTATCTGTTGGGACATCACTCGTCAAACCGGGTGGAGTCCTCACAAATTCTCAGAGGCTATCCACTGCAGGTGCTGAACAAGAAACAGATAAATGGGGATGCAGACTCTATTAGCAGCGGGAAGCATGCCATGGTCCAAAACTTCTCAAAGGCCAACAGGATTCCCCAATCTAGTCAGTTTTTCATGCAAGACTTTTATCATGAGAAGTGCAATGGTTCGAAAACTCCCCATTCTGTGGCTGAGCTTCCACTTCTTCCCAAGAGTCATGAACAATCATCAAGTGATCATTCGAGATCCCATTCTCGGAGTAGCTCTGATACAGAAGAGCAATCTCGCAAGAGTGGTGATGTCAAACTTTTTGGTCAAATTCTTAGTCATCCGTCGCCTTTGCAGAAGTCAATTCCCTCTGCTCAGGAAACTGACACGAAGAGAGCATGTCCTAAATCAAGAAGCAAGTCATTTGACTTGAAGTTCAATGCTGATCATGGGATCAATGGAACTTCTGTGTCATCGAACCTTGATGCAAACAGTTGTACAGGCTTGGAGGATTTCCCGGTACGGAGTTTTGGTTTCTGGGATGGGAATAGGATACAGACCGGACTGTCATCGCTACCAGATTCTGCAATTTTATTGGCGAAATATCCAGCAGCGTTCAGTGATTATTCGACATCTTCTTGCAAAGATCAGCAGCCATTGCCTGCAGTTGTCAAGAGGAATGACCGGAACTTGAGTTGTGTGTCGGTTTTTCCGACTAAGGATGTAACTGGTAATGGGGGTTTGACAGATTATCAGGTATATGGAGGCTACGATGGGACAAAATTGCAACCATTCACAGTAGATGTGAAGCGACAAGATATTTTGTCCGAGCGACATAAACGGAATGGATTTGAAAAGGTATCAGGTTTTCAACAACAGGGAAGAGGAGGGGTGGTGGGAATGAATGTCATGGGGGGAGGGATACTGGTTGGAGGTGGTTGCACGGGTGTTTCGGACCCCGTAGCAGCCATAAAGATGCATTATGCCACAGCTGAGCGGTATGGTGGGAAGGCTGGGAGCATCAGGGAAGAGGAGTCGTGGAGAGGAGGGGACATAGGCAGTCCTGAATTTGGGCCACCTTTGGGATGCCTAGGATCTTTGGATTGGGTTGCTGCCTTGCTGGGCGTAGTAGATGGCCAGGATCCCACTCCAGAATGCCGGAGGTTCTGA 5478 0.4617 MPPEPLPCDRKDFFKEKKHERSDALGSIVRWRDSNHGPREFARWGPEECQRRPPGHGKQGGYQLFSDESVHGSMPSRSSERMVEDESCRPAASRGEGKYGRNNRENKGSFSQKDGKGHPWEAVDASVTSSVRQHDMSAQRSVSDLLIYPSNPHSDIEHSSCNQLHSKDHHDKMGSVDGLGTGHRYDKEHSLGSIAWKPLKWTRSSSLSSRGSGFSHSSSSRSMRADSDETRPDLPSGKVTPVQSPSGDAAGGATSAASFEETCPRKKQRLGWGQGLAKYEKAKVEGPDENVIKNGLVLYATTISTTSVSASLPDKSPRVTGLSECASPATPSSVACSSSPGLEDKSHIKAANNDNDTSNLSGSPGRGFQNCLEEFSVNLEHLELNPITNLSSLLIDLLQPEDANSGDSSFVRSTATNKLLLIKSDILKAVEETECEIDLLENELKRLNSELETSGPHATTSDFLEVQCASKACEEVGPVSKVFHKPAPLQLVSSGNMLVEKPVLCMDTFEEVRAEVKDDDIDSPGTATSKILEPLSMKAVSASDMVKHGHSADFEATRSTSPEEQCSVPPVDEKKSASLSGSRDGNPLNQSGITSRVSSGLNIRSDAECKLNVSILASNRDSARRASEIFTKLLPTDQPPIDIWGTISVSCRQNTSLVKEKLAMRKCFQRFKERVLTLKFRTFQYLWKEDMRLLSIRKYRAKSQKRFELSSRTLPNGQQKHRSSIRSRFASHAGDLIFVPTTEVVDFTSKLLSDSQIKHYRDNLKMPALILDEKEKKLSMFVTSNGLIEDPCAVEKERVMINPWTPKEKEIFMDMLATFGKDFKKISNFLDHKTTADCIEFYYKNHKSESFEKIKKKLEIRKQGRNFPTNTYLVTSGKKWNREVNAASLDLLGTAAAHADDRVKTQQTCVRRSYLRGDYNHKTPCSGDAVFERSTSVDILGNEREAAAADVLAGICGALSSEAMSSCVTSSIDPGEGCQEWKCQKRTSASDRPLTPEVMQNIDDEETCSDESCGELDSVDWTDEEKSIFIQALRSCGKDFAKISRCVRTRSRDQCKIFFSKARKSLGLDEIHPGSGNEVTPLSDANGGRSDPEDACVVEMESAICSTQSCSKMDVDLPSTVTDTNCELSGHAVTTHLQTEPDKSGERNGIEGLDCDDAETMIETMVLDDCQAGVKPVLLCDGDNNLVNGVEGKFGATHEVSKCDDAVVADATLSCDLPVRHHENTDLTADGEAAKEQGTCQTVTPAEESACAGGPTGLGQSRSNAAVELKAISGASAEGLKTESEQLHFLVPESGPNDGGDAKTGADSNRRSSSCFFVPDSNSNRNASHLEGETSVRPGFSLTPSYQHQISREFLPSVQKSQIISWQQKENCPTVPANLVVRDSSAIHYEDRLRQTQQPSSALNSEETGNREHQNTASRDVYQQYLLGHHSSNRVESSQILRGYPLQVLNKKQINGDADSISSGKHAMVQNFSKANRIPQSSQFFMQDFYHEKCNGSKTPHSVAELPLLPKSHEQSSSDHSRSHSRSSSDTEEQSRKSGDVKLFGQILSHPSPLQKSIPSAQETDTKRACPKSRSKSFDLKFNADHGINGTSVSSNLDANSCTGLEDFPVRSFGFWDGNRIQTGLSSLPDSAILLAKYPAAFSDYSTSSCKDQQPLPAVVKRNDRNLSCVSVFPTKDVTGNGGLTDYQVYGGYDGTKLQPFTVDVKRQDILSERHKRNGFEKVSGFQQQGRGGVVGMNVMGGGILVGGGCTGVSDPVAAIKMHYATAERYGGKAGSIREEESWRGGDIGSPEFGPPLGCLGSLDWVAALLGVVDGQDPTPECRRF* 1826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1515 1539 - -
Eupl01g01560 1825 Gene3D - 978 1074 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 203 272 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1551 1572 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1 181 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1291 1313 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 542 595 - -
Eupl01g01560 1825 CDD SANT 1021 1059 IPR001005 -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 203 221 - -
Eupl01g01560 1825 Coils Coil 423 450 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 126 159 - -
Eupl01g01560 1825 SUPERFAMILY Homeodomain-like 787 849 IPR009057 -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 78 120 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 309 364 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1069 1092 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1391 1416 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1551 1566 - -
Eupl01g01560 1825 Pfam Myb-like DNA-binding domain 1020 1060 IPR001005 -
Eupl01g01560 1825 Pfam Myb-like DNA-binding domain 803 844 IPR001005 -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 237 251 - -
Eupl01g01560 1825 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1785 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 580 595 - -
Eupl01g01560 1825 ProSiteProfiles SANT domain profile. 1016 1067 IPR017884 -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 160 181 - -
Eupl01g01560 1825 ProSiteProfiles SANT domain profile. 799 850 IPR017884 -
Eupl01g01560 1825 Gene3D - 780 852 - -
Eupl01g01560 1825 SUPERFAMILY Homeodomain-like 1020 1069 IPR009057 -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 8 54 - -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 323 340 - -
Eupl01g01560 1825 SMART sant 800 848 IPR001005 -
Eupl01g01560 1825 SMART sant 1017 1065 IPR001005 -
Eupl01g01560 1825 MobiDBLite consensus disorder prediction 1511 1539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01560 Eupl-Chr1 36637922 36658900 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl01g01560 Myb_DNA-binding 1.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01560 - - nnu:104602664 1980.3