Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01547 ATGAGTGTGATCGACCTTCTGACGCGCGTCGATTCGATCTGCAAGAAATACGACAAGTACGACATCGACAAGCAGAAAGACCTCAACGTTTCCGGCGACGATGCGTTCGTTCGTCTCTACGCTGCCGTCGAGTCCGACATCGATGCAGCTCTCCAGAAATCGGAGGTTGCTTCGAAGGAGAATAACAGAGCCGCTGCGGTCGCCATGAATGCTGAGATCCGCCGAACCAAGGCTCGATTGCTCGAGGAGGTCCCAAAGTTACAGAGATTAGCGCTTAAAAAGGTTAAAGGCCTTACAAAAGAAGAACTTGCAACCCGTAATGACTTGGTTCAAGCATTGTCGGAGAGGATTCAAGAAATACCAGATGGGACTGCAACTGGAGCTAAACAAAGTGGAGGTTGGGCAGCGTCAGGCTCTCGCCAGGAAATTAAATTTGACACAACATCAGGTGGAAGATTTGATGGTGAATTCTTTCAGAAAACCGAAGAGTCAAGTCAGTTTAGGCAAGAGTTTGAAATGCGGAAAATGAAACAGGATCAAGGTCTGGAAGTTATATCAGAAGGGTTGGATACGCTTAAAAATATGGCTCATGACATGAATGAGGAAGTGGACAGGCAAGTGCCTTTGATTGATGAAATTGACACCAAGGTGGACAGGGCGACCTCTGACCTTAAGAATACTAATGTGAGACTTAAGGACACTGTTACCCAGCTGAGGTCCAGTCGGAACTTCTGTATCGATATTATTCTGTTGTGTATAATTCTAGGAATCGCTGCCTATTTATATAATGTATTGAAGAAGTGA 804 0.4565 MSVIDLLTRVDSICKKYDKYDIDKQKDLNVSGDDAFVRLYAAVESDIDAALQKSEVASKENNRAAAVAMNAEIRRTKARLLEEVPKLQRLALKKVKGLTKEELATRNDLVQALSERIQEIPDGTATGAKQSGGWAASGSRQEIKFDTTSGGRFDGEFFQKTEESSQFRQEFEMRKMKQDQGLEVISEGLDTLKNMAHDMNEEVDRQVPLIDEIDTKVDRATSDLKNTNVRLKDTVTQLRSSRNFCIDIILLCIILGIAAYLYNVLKK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01547 267 SUPERFAMILY SNARE fusion complex 165 232 - -
Eupl01g01547 267 SMART tSNARE_6 167 234 IPR000727 -
Eupl01g01547 267 FunFam Putative syntaxin-71-like 172 233 - -
Eupl01g01547 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Eupl01g01547 267 CDD SNARE_Qc 177 232 - -
Eupl01g01547 267 Gene3D - 172 233 - -
Eupl01g01547 267 PANTHER SYNTAXIN 58 254 IPR045242 -
Eupl01g01547 267 MobiDBLite consensus disorder prediction 121 141 - -
Eupl01g01547 267 ProSitePatterns Syntaxin / epimorphin family signature. 178 217 IPR006012 GO:0005484|GO:0006886|GO:0016020
Eupl01g01547 267 Pfam SNARE domain 209 258 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01547 Eupl-Chr1 36454209 36467021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01547 1 266 SNARE and Associated Proteins AT3G09740 76.119 1.79e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01547 K08506 - pda:103714328 438.343