Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01546 ATGGCGGAGAGACAACAACCCAGTTCAAATATTCAACTTCCTCCTGGCTTTAGATTCCACCCATCAGATGAGGAGCTCATCATTCATTATCTAAGGAACAAAGCAACTTCACGTCCGATCCCGGCATCCATTATCGCCGAAGTGGACCTCTACAAGTACAATCCATGGGAGCTACCGAAGAAGGCTTTGTTTGGTGAGGAAGAGTGGTACTTCTTCAGTCCAAGGGATAGGAAGTATCCGAATGGAGCACGGCCTAATAGAGCAGCAGCTTCAGGTTATTGGAAGGCGACAGGGACAGACAAACCAATTCTCACTTCTTGCGGATCACAGAGTGTTGGAGTGAAGAAAGCTCTAGTCTTCTACGAAGGTCGTCCCCCAAAGGGACTTAAAACTGACTGGATCATGCATGAATATAGATTGCTTGATACCATGATCCGGCCTTCAAGGTTAAGAGGTTCTATGAGATTGGACGATTGGGTACTGTGTCGAGTTCGACATAAAGGCAACACACCAAGGATCACTTGGGAAGATCGAGACGACGGTGGTCGGACTGAACCAGTTGGCTACTTACCAAATGTTGAGGAGCAACCAAGTGCAAATCCTAATTTAGAGGTGGTGGCAAATTATCTCCATAAAGATTGCCCTATTATGGCTTACATATTTGCCTCTCAAGATGTTCCTCCCACCGAACCCGCCTCGAATTTAAGCTTTCAAGGTGGTACCAATAGCAACAATTACAGAACAATCTACGACGACGTTGGAGATGAACGAAATTCAGCCATGACTGCTTCTTCTGTCAATGATCTGTTCAACCCACCCGTTGAGGGGAATACAGAATATGAGCCTGTAATCCCATCAAGCAAGAAACTAACCATTAGCAACAACAATACTGACTTGAGCTTTAGCAGACAGTATCCGAATCAATGA 927 0.4542 MAERQQPSSNIQLPPGFRFHPSDEELIIHYLRNKATSRPIPASIIAEVDLYKYNPWELPKKALFGEEEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILTSCGSQSVGVKKALVFYEGRPPKGLKTDWIMHEYRLLDTMIRPSRLRGSMRLDDWVLCRVRHKGNTPRITWEDRDDGGRTEPVGYLPNVEEQPSANPNLEVVANYLHKDCPIMAYIFASQDVPPTEPASNLSFQGGTNSNNYRTIYDDVGDERNSAMTASSVNDLFNPPVEGNTEYEPVIPSSKKLTISNNNTDLSFSRQYPNQ* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01546 308 Gene3D NAC domain 22 171 IPR036093 GO:0003677|GO:0006355
Eupl01g01546 308 ProSiteProfiles NAC domain profile. 13 167 IPR003441 GO:0003677|GO:0006355
Eupl01g01546 308 FunFam NAC transcription factor 56 22 172 - -
Eupl01g01546 308 PANTHER NAC TRANSCRIPTION FACTOR 56 13 191 - -
Eupl01g01546 308 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
Eupl01g01546 308 MobiDBLite consensus disorder prediction 289 308 - -
Eupl01g01546 308 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01546 Eupl-Chr1 36448042 36450448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01546 12 176 NAC Transcription Factor Family AT1G61110 69.942 9.40e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl01g01546 NAM 7.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01546 - - vvi:100248298 390.193