Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01535 ATGTTTTGCAAGAATAATCCCATCTCGGGATTGACAGAAATGGGCTGCTGTAGTTGCTTTGGATTCATAAGGAAGCCCAAAAGATCATTGAGGCCGGCTTCTGCCTCTGATAATCGGATTTCCCAGGAGTTTTTGTTGAATGATAATCTAGAAGATGTTGATGGTGTTTTATATAATGGTGAACCTACTAATATCCTACATGGAAGTGATGGAGAGTTACGAAGTCGCGCAAAACGCTCTGAAGAGATTCTCTTGCTTAGAATTCAAAATGGAATGATATGCAGGGAAGTTCCTGTCAAGGAAACTCGTCAGGTTATTCGTACAGAGGATGAAAATGGAAACAAAATGGTTAATGAATACGTTCGAGAGTGTAAGATCGGTTCTGGAAGCTATGGAAAAGTGGTTTTATACCGAAGCAATAAAGATGGAAAGCAGTATGCTATTAAGGCTTTTCACAAGTCTCATTTATCAAAGCTGCGAGTAGCACCTTCAGAAACTGCCATGACTGATGTTCTTCGGGAGGTTTTAATTATGAAAATTTTGGCCCATCCCAATATAGTCAATCTCATTGAGGTGATTGATGACCCCAACACAGATAACTTCTACATGGTTCTCGAATATGTGGAAGGTAAGTGGGTCTGTGAAGGTTCTGGTCCACCAAGTGGCTTAGGGGAAAGTACTGCCAAAAAGTACCTGCGGGACATAGTTGCTGGGCTCATGTATCTCCATGCTCATAATATAGTGCATGGTGACATTAAGCCTGATAACCTTTTGGTGACAAGCACTGGCACAGTGAAGATAGGAGATTTCAGTGTCAGCCAGGTCTTTGAGGATGATAATGATGAGCTTCGACGATCTCCTGGGACCCCTGTTTTCACTGCACCCGAGTGCTGTTTAGGTCTAACCTACCACGGTAAAGCTGCAGATGCATGGGCTCTGGGTGTTACTTTGTACTGTATTGTACTTGGTCAATATCCATTTCTTGGAGACACTTTACAGGATACATATGATAAGATTGTTAATAATCCTTTATCTATCCCAGAGGGCATTGACCCACAGTTGAAGAACATACTAGAAGGACTTCTCTGCAAAGATCCAAAACAGAGGATGACCTTGAATGCTGTTGCTGGACATCCCTGGATTGTTGGAGAAGAAGAGCAAATCCCTCAGTTTTTATGTTGGTGCAAGCGTAATAGTTTCCAGCGAGAAGAAAATGACGAGAGCAGAAAGGATGCTTACATGACTAGTACTGACTGA 1257 0.4216 MFCKNNPISGLTEMGCCSCFGFIRKPKRSLRPASASDNRISQEFLLNDNLEDVDGVLYNGEPTNILHGSDGELRSRAKRSEEILLLRIQNGMICREVPVKETRQVIRTEDENGNKMVNEYVRECKIGSGSYGKVVLYRSNKDGKQYAIKAFHKSHLSKLRVAPSETAMTDVLREVLIMKILAHPNIVNLIEVIDDPNTDNFYMVLEYVEGKWVCEGSGPPSGLGESTAKKYLRDIVAGLMYLHAHNIVHGDIKPDNLLVTSTGTVKIGDFSVSQVFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADAWALGVTLYCIVLGQYPFLGDTLQDTYDKIVNNPLSIPEGIDPQLKNILEGLLCKDPKQRMTLNAVAGHPWIVGEEEQIPQFLCWCKRNSFQREENDESRKDAYMTSTD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01535 418 SUPERFAMILY Protein kinase-like (PK-like) 115 397 IPR011009 -
Eupl01g01535 418 Gene3D Phosphorylase Kinase; domain 1 114 216 - -
Eupl01g01535 418 FunFam Serine/threonine-protein kinase GRIK2 110 416 - -
Eupl01g01535 418 ProSiteProfiles Protein kinase domain profile. 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01535 418 FunFam Serine/threonine-protein kinase Ssp1 114 216 - -
Eupl01g01535 418 CDD STKc_LKB1_CaMKK 126 381 - -
Eupl01g01535 418 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 80 383 - -
Eupl01g01535 418 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Eupl01g01535 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Eupl01g01535 418 Gene3D Transferase(Phosphotransferase) domain 1 218 393 - -
Eupl01g01535 418 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01535 418 Pfam Protein kinase domain 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01535 Eupl-Chr1 36317293 36333677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01535 115 381 CBL-interacting serine-threonine protein kinases AT5G35410 34.082 1.80e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Eupl01g01535 Pkinase 3.9e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01535 K00908 - nnu:104594834 680.633