Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01514 ATGGCGATGGCCGTCGCGCCACACAGAGAAAGCAGCAGCATCAGCAAGCATCTTGACGCTGGAAAGTATGTCCGATACACCGCCGAGCAGGTCGAAGCTCTCGAACGAGTCTACATAGAATGTCCAAAGCCAAGTTCGATGCGGCGGCAGCAACTCATCCGCGAGTGTCCGATCCTCTCCAACATTGAACCCAAGCAGATAAAAGTCTGGTTTCAGAATCGCAGGTGCCGCGAGAAGCAGAGGACAGAGGCTTCCCAACTTCAGACTGTGAACCGGAAATTGTCTGCAATGAACAAGTTGTTGATGGAGGAGAATGATCGCCTTCAGAAACAGGTATCCCAGCTCGTGTACGAGAATGGATACATGCGGCATCAAGTGCAAAATGCGTCTGCGACAACTGCTGATACAAGCTGTGAGTCTGTGGTTACCACTCCTCAGCATTCTCTAAGGGATGCAAATAATCCCGCTGGACTCTTCTCAATTGCAGAGGAGACCTTGACAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCAATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATTGTTGCCGTTTCACACAGTTGTAGTGGAGTGGCAGCACGAGCCTGTGGTCTAGTTAGTTTAGAATCTACAAAGATTGCAGAGATCCTCAAAGATCGTACATCTTGGTTCCGAGATTGCCGGAGCCTTGAAGTCTTCACCACGTTTCCTGCTGGAAATGGGGGGATAATTGAGCTTATATACATGCAGATGTATGCTCCAACAACACTGGCTCCTGCACGTGACTTTTGGACTCTGAGATATACTACTAATTTAGAAGATGGAAGTCTCGTGGTCTGCGAGAGATCACTATCTGGTTATGGTGCTGGCCCAAATGCATCCACTGCTCCCCAATTTGTAAGAGCTGAGATGCTGCCCAGTGGTTATTTGATTCGGCCATGTGATGGGGGAGGGTCTATCGTCCACATTGTCGACCACCTAGATTTTGAGGCATGGAGTGTTCCCGAGGTTTTACGACCACTTTATCAGTCATCAAAAGTCGTAGCTCAGAAGATGACAATTGCGGCACTGCGCCACATCAGGCAAATAGCTCAGGAGACAAGTGGAGAAGTGGTTTATGGTTTGGGTAGGCAGCCTGCTGTTCTGCGAACTTTTAGTCAAAGATTGAGCAGAGGATTCAATGATGCAGTCAATGGATTCAACGATAATGGATGGTCATTGATGAACTGTGATGGTGCTGAAGATGTGATAATTGCTGTTAATTCCGGCAAGGACATGGGAACCACTGCCAGTCCTGCCACCGCTCTCCCATTGCCTGGAGGTATCCTCTGTGTGAAGGCATCTATGCTACTCCAAAATGTTCCTCCCGCGTTGCTAGTTCGGTTCTTGAGAGAGCACCGGTCTGAGTGGGCTGATTACAATGTTGATGCTTATTCTGCTGCATCGTTGAAAGCTGGCTCTTATGCTATTGGGGGATTGAGGTCCACGAGGTTCTCTGGGAGCCAAATCCTCATGCCACTTGGTCACACGGTGGAACACGAAGAGTTGCTTGAAATAATTCGGCTTGAAGGCCATGCGCTCACTCAAGAAGAAGCTTTTTTATCCAGGGATATTCATCTCTTACAGATTTGTAGTGGAGTGGACGAGAATGCAGTGGGATCCTGCTCTGAACTTGTTTTTGCTCCAATTGACGAAATGTTTCCGGATGATGCTCCACTGCTACCCTCTGGTTTTCGGATCATACCGTTGGACCCAAAAACATGTGAAACACAGGATACGTTGACTGCACATCGGACATTAGATCTGGCATCCAGCCTTGAAGTGGGCCCAGTAATGACTCGGACCACTGGAGACATTTCTCCAAATGCTTATAGCGCGCGCTCAGTTTTGACCATCGCCTTTCAATTCCCTTTCGAGAGTCATCTCCAGGATAGTGTTGCGACCATGGCTCGGCAATATGTCCGCGGTGTGATTTCCTCCGTGCAGAGGGTTGCCATGGCCATAGTTCCATCTGGACTGGGCTCGTCACATGTTGGACCGAAGCTATCTCCAGGTTCTCCAGAAGCTCTTACACTTGCTCATTGGATCTGCAAAAGCTATAGTTACCATCTAGGAGCAGAACTGCTGAGGTCCAATCGTGAGGGAGGTGACTCCGTCTTGAAACTGCTCTGGCACCATCCGGATGCAATATTGACCTGCTCATTGAAGGGTGTTGTGGTTGGTTTGCAGTCGCTACCAGTCTTCACCTTCGCCAACCAAGCGGGGCTTGACATGCTGGAGACCACGCTGGTGGCTCTACAGGACATTACGCTGGAGAAGATATTTGACGAGTCTGGTCGGAAGGCATTGTGCTCCGATTTTGCCAAGATAATGCAGCAGGGGTTTGCTTATCTGCCAGCTGGAATCTGCATGTCAACCATGGGGCGCCACGTGTCTTATGAACAAGCCATCGCCTGGAAAGTCCTCACGGAAGAGAACACTGTCCACTGCCTTGCCTTCGCTTTTGTCAATTGGTCTTTTGTGTAA 2547 0.4951 MAMAVAPHRESSSISKHLDAGKYVRYTAEQVEALERVYIECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRTEASQLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMRHQVQNASATTADTSCESVVTTPQHSLRDANNPAGLFSIAEETLTEFLSKATGTAVNWVQMPGMKPGPDSVGIVAVSHSCSGVAARACGLVSLESTKIAEILKDRTSWFRDCRSLEVFTTFPAGNGGIIELIYMQMYAPTTLAPARDFWTLRYTTNLEDGSLVVCERSLSGYGAGPNASTAPQFVRAEMLPSGYLIRPCDGGGSIVHIVDHLDFEAWSVPEVLRPLYQSSKVVAQKMTIAALRHIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGWSLMNCDGAEDVIIAVNSGKDMGTTASPATALPLPGGILCVKASMLLQNVPPALLVRFLREHRSEWADYNVDAYSAASLKAGSYAIGGLRSTRFSGSQILMPLGHTVEHEELLEIIRLEGHALTQEEAFLSRDIHLLQICSGVDENAVGSCSELVFAPIDEMFPDDAPLLPSGFRIIPLDPKTCETQDTLTAHRTLDLASSLEVGPVMTRTTGDISPNAYSARSVLTIAFQFPFESHLQDSVATMARQYVRGVISSVQRVAMAIVPSGLGSSHVGPKLSPGSPEALTLAHWICKSYSYHLGAELLRSNREGGDSVLKLLWHHPDAILTCSLKGVVVGLQSLPVFTFANQAGLDMLETTLVALQDITLEKIFDESGRKALCSDFAKIMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLTEENTVHCLAFAFVNWSFV* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01514 848 Coils Coil 87 118 - -
Eupl01g01514 848 SUPERFAMILY Bet v1-like 160 372 - -
Eupl01g01514 848 CDD homeodomain 22 79 IPR001356 GO:0003677
Eupl01g01514 848 SUPERFAMILY Homeodomain-like 21 86 IPR009057 -
Eupl01g01514 848 ProSiteProfiles START domain profile. 151 379 IPR002913 GO:0008289
Eupl01g01514 848 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 18 848 IPR044830 GO:0003700
Eupl01g01514 848 SMART START_1 160 370 IPR002913 GO:0008289
Eupl01g01514 848 CDD START_ArGLABRA2_like 155 371 - -
Eupl01g01514 848 Pfam START domain 161 368 IPR002913 GO:0008289
Eupl01g01514 848 CDD bZIP 74 113 - -
Eupl01g01514 848 SMART HOX_1 19 85 IPR001356 GO:0003677
Eupl01g01514 848 SUPERFAMILY Bet v1-like 405 596 - -
Eupl01g01514 848 Gene3D - 14 89 - -
Eupl01g01514 848 Pfam MEKHLA domain 698 847 IPR013978 -
Eupl01g01514 848 Gene3D - 193 377 IPR023393 -
Eupl01g01514 848 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677
Eupl01g01514 848 FunFam Homeobox-leucine zipper protein REVOLUTA 22 77 - -
Eupl01g01514 848 Pfam Homeodomain 22 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01514 Eupl-Chr1 36074329 36086757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01514 1 848 Homeobox Transcription Factor Family AT5G60690 77.130 0.0 1354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl01g01514 START 1.5e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01514 K09338 - ming:122062860 1474.91