Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01499 ATGGAAACCGCGCTCGATCGCATACGATCGCACCTACTAGAAGGATCTGACCGAGCCATGCAGCCATCCAATCTCGTCCTTCACTCTCCATCTGATTCCTCTTTGACGGACTGCAACTCATATGATTCCTCTCTTTCTCCACCGTCCAAGCGCCGGAAAACTGATGGTTCTGATTCTTCAGTGGAAGAAGAAATCAACGGCAACGAGGACGAGAAATTCGTCCAGAGCGCCTTAGCTTTCGACTGTGCCGAAGGAGGATGCCTTACGCTCCTCGCTGACGTGGAGGATAACGTGGCAAAGAATACCCATCCTGCGCCGTTGAATTTACCGGCCTCAGCTTATTATCATCTTCATAGCAGCAACCAAATTACGTCGTTAGATTTTTCGAGTGTGGCCGTTAAATATAACGGTTGCCCGAGCCCTAGTGTTTCAGGTGGTTGGGAGAAGTTACCTTTAAATGAGAACGATTCCGAGGACATGGTTTTGTATGGAGTCTTGCAGGAAGCCACGATGAGAGGGTGGCAGCCGATCACGCCAACGACTCAGTCTGTATCTGAAACGGCTTATGCGGCTCCAGCCAAGCCGAATCCTAAACCAAAGCCAGCAAACGAGACTCCCACCGCCACGCCGACGAAGAAGAAACGAGTTGGGCGGCACTATCGAGGAGTGAGAGAGCGGCCATGGGGGAAATTCGCGGCTGAAATTCGTGACTCGGCGCGCCAGGGAGCTAGAGTATGGCTTGGAACGTTCGATACGGCTGAGGAGGCCGCGATGGCTTATGATCGTGCAGCTTACAAGATGCGTGGTGCACGGGCTCTGTTGAATTTCGCTATTTGTGCTGGTAGTGACGGAAGCTCAGGGGCTGTAACTGATCGAGGCAGTGATGGTGGATTAGCTACGAGTCGAGCTGATTGCAATGGCTCATAA 927 0.5221 METALDRIRSHLLEGSDRAMQPSNLVLHSPSDSSLTDCNSYDSSLSPPSKRRKTDGSDSSVEEEINGNEDEKFVQSALAFDCAEGGCLTLLADVEDNVAKNTHPAPLNLPASAYYHLHSSNQITSLDFSSVAVKYNGCPSPSVSGGWEKLPLNENDSEDMVLYGVLQEATMRGWQPITPTTQSVSETAYAAPAKPNPKPKPANETPTATPTKKKRVGRHYRGVRERPWGKFAAEIRDSARQGARVWLGTFDTAEEAAMAYDRAAYKMRGARALLNFAICAGSDGSSGAVTDRGSDGGLATSRADCNGS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01499 308 FunFam Ethylene-responsive transcription factor 2 218 278 - -
Eupl01g01499 308 Gene3D AP2/ERF domain 218 279 IPR036955 GO:0003700|GO:0006355
Eupl01g01499 308 PRINTS Ethylene responsive element binding protein signature 220 231 IPR001471 GO:0003700|GO:0006355
Eupl01g01499 308 PRINTS Ethylene responsive element binding protein signature 243 259 IPR001471 GO:0003700|GO:0006355
Eupl01g01499 308 SUPERFAMILY DNA-binding domain 219 277 IPR016177 GO:0003677
Eupl01g01499 308 MobiDBLite consensus disorder prediction 187 219 - -
Eupl01g01499 308 MobiDBLite consensus disorder prediction 283 308 - -
Eupl01g01499 308 MobiDBLite consensus disorder prediction 48 68 - -
Eupl01g01499 308 Pfam AP2 domain 219 269 IPR001471 GO:0003700|GO:0006355
Eupl01g01499 308 MobiDBLite consensus disorder prediction 15 68 - -
Eupl01g01499 308 CDD AP2 219 278 IPR001471 GO:0003700|GO:0006355
Eupl01g01499 308 ProSiteProfiles AP2/ERF domain profile. 219 277 IPR001471 GO:0003700|GO:0006355
Eupl01g01499 308 SMART rav1_2 219 283 IPR001471 GO:0003700|GO:0006355
Eupl01g01499 308 MobiDBLite consensus disorder prediction 22 47 - -
Eupl01g01499 308 PANTHER DNA-BINDING DOMAIN 183 277 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01499 Eupl-Chr1 35857181 35858468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01499 141 278 AP2-EREBP Transcription Factor Family AT4G17500 51.007 7.91e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl01g01499 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01499 K09286 K13433 msin:131245937 286.189