Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01492 ATGGGCAGCCAAATCTACGAGAACGGGAATGGAAACGGGTCGACGGAAAGTTTCTGCATCAAAGACCCATTGAACTGGGGAATGGCAGCGGAGTCTCTAAAGGGAAGTCATCTTGATGAGGTTAAGCGTATGGTGGAGGAGTTCCGTAAGCCAGTGGTTAGACTCGGGGGTGAGACCCTGACAATCTCACAGGTGGCCTCTATTGCTGCTCATGAAACAAACGTGAAGGTGGAGCTTTCAGAGTCGGCAAGGGCTGGCGTGAAAGCAAGCAGCGATTGGGTGATGGACAGCATGAACAAAGGAACAGATAGTTATGGCGTCACAACTGGGTTTGGTGCAACTTCACACAGGAGAACCAAACAAGGAGGAGCCCTTCAGAAGGAACTTATTAGATTCTTGAACGCTGGAATCTTTGGCAATGGGACGGAATCTTGCCACACATTGCCTCACTCTGCAACAAGAGCAGCTATGCTGGTGAGAATCAACACCCTGCTCCAAGGATACTCTGGCATCCGGTTTGAGATCATGGAAGCCATCACCAAATTCCTCAATCACAACATCACCCCATGCTTGCCTCTCAGAGGTACGATTACTGCGTCGGGTGATCTCGTCCCTTTATCCTACATTGCTGGGCTCTTGACCGGTAGGCCCAATTCCAAAGCGGTAGGACCCGATGGAAAAATCCTTGATGCCGAAGAAGCTTTCCACCACGCCGGGATCAATGGTGGGTTCTTTGAATTACAGCCCAAGGAAGGTCTTGCACTTGTTAATGGCACTGCAGTGGGGTCTGGTTTGGCTTCGATGGTTTTATTCGAAGCTAACATCCTAGCCGTCCTTTCGGAAGTCATTTCCGCGATCTTTGCCGAAGTCATGCAAGGCAAACCGGAGTTTACAGACCATCTGACCCACAAATTGAAGCATCACCCAGGCCAAATTGAAGCAGCAGCTATCATGGAACACATCTTAGATGGAAGCTCCTACGTGAAGGCAGCTCAGAAGCTTCATGAAATTGATCCTCTACAGAAGCCAAAGCAAGACCGATACGCTCTCCGTACTTCTCCCCAATGGCTGGGCCCACAGATCGAAGTGATCAGATCATCTACCAAATCGATTGAACGGGAGATCAACTCTGTTAATGATAACCCCTTGATTGATGTCTCTAGAAACAAGGCCCTCCATGGTGGAAACTTCCAAGGGACGCCAATTGGAGTCTCTATGGACAACACTCGGTTAGCAATTGGATCAATCGGGAAGCTCTTGTTCGCACAATTCTCCGAGCTTGTCAACGATTTCTACAACAATGGATTGCCTTCGAATCTATCAGGTGGAAGAAATCCAAGCTTGGATTATGGATTCAAGGGTGCAGAGATTGCAATGGCATCATACTGCTCAGAACTCCAATTTCTCTCAAATCCAGTCACCAATCATGTTCAAAGTGCAGAGCAACACAACCAAGATGTGAACTCCTTGGGCTTGATTTCTTCAAGAAAAACTGCAGAAGCTGTCGATATCTTGAAGCTCATGTCTTCGACTTTCTTAGTTGCACTTTGCCAAGCAATTGATCTAAGGCATTTGGAGGAGAATTTGAAGAATACTGTGAAGAACACAGTAAGCCAAGTAGCTAAGAGAGTTCTAACAATGGGGGTTAATGGGGAGCTACATCCTTCAAGGTTCTGCGAGAAGGAATTGCTCAAGGTTGTCGATCGTGAATATGTCTTCGCCTACATTGATGATCCCTGCAGTGCTACTTACCCACTAATGCAGAAATTAAGGCAAGTTCTTGTCGAACATGCGTTGATCAATGGCGATAATGAGAAGAATTCAAACACTTCAATCTTTCAAAAGATCGGTGCGTTCGAGGAGGAATTGAAAACCCTTTTACCAAAAGAAGTTGAGAATGCGAGGTGCGCGTTGGAGAGTGGGAACCCGGCAATTCCTAACCAAATTAAGGAATGCAGGTCGTACCCATTGTACAAGTTTATTAGGGAAGAATTGGGTACTGGACTACTGACTGGGGAGAAGGTTCAATCACCGGGTGAGGCATTTGACAAGGTGTTCTCAGCGATGTGCGAGGGGAAGATGATCGATCCTCTGCTTGACTGTCTCAGGGAATGGAATGGTGCTCCTCTTCCAATCTGTTAG 2142 0.472 MGSQIYENGNGNGSTESFCIKDPLNWGMAAESLKGSHLDEVKRMVEEFRKPVVRLGGETLTISQVASIAAHETNVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPDGKILDAEEAFHHAGINGGFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIGSIGKLLFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLSNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFCEKELLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVEHALINGDNEKNSNTSIFQKIGAFEEELKTLLPKEVENARCALESGNPAIPNQIKECRSYPLYKFIREELGTGLLTGEKVQSPGEAFDKVFSAMCEGKMIDPLLDCLREWNGAPLPIC* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01492 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Eupl01g01492 713 Pfam Aromatic amino acid lyase 60 536 IPR001106 -
Eupl01g01492 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Eupl01g01492 713 FunFam Phenylalanine ammonia-lyase 14 259 - -
Eupl01g01492 713 NCBIfam phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Eupl01g01492 713 FunFam Phenylalanine ammonia-lyase 260 560 - -
Eupl01g01492 713 SUPERFAMILY L-aspartase-like 22 713 IPR008948 GO:0003824
Eupl01g01492 713 Gene3D - 14 259 IPR024083 -
Eupl01g01492 713 PANTHER HISTIDINE AMMONIA-LYASE 22 713 IPR001106 -
Eupl01g01492 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Eupl01g01492 713 Gene3D - 526 647 IPR023144 -
Eupl01g01492 713 CDD PAL-HAL 58 523 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01492 Eupl-Chr1 35733249 35737294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01492 20 713 Monolignol Biosynthesis Gene Families AT3G53260 83.862 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01492 K10775 - nnu:104601277 1302.73