Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01488 ATGCATGCTCGTGGATGTACAGGTCCTCTTGGGCCCTTTACTGGGTATGCTACAATTTTAAAGAGTTCAAAGTACTTGAAGCCTGCCCAACAGCTTTTGGATGAATTTTGCAGCGTTAATGGCTCAAAACTCGTCAAAACATGTGAATTGTCTAAGAAGGGTTCCGGAGATGTAAGCCAGTCGTCTGATCCCATGAATACTGAAAATGAGGTTGGTGTGCGGGACAAGAACTCAGGTATCTCCTCTTCTTCGTTTTACAGTTCTAATGAAACTGGTGGTCAAGGTGGAGTTGGCAGTCGATCTTGTCAATCTTTTCAGCCTGAGTTCCAACAAAGGAAGGCAAAGCTCACATACATGCTGGAGGAGGTTTGCAGAAAATACAAGCAATACCACCAGCAGATGCAAATGGTGGTGTCATCCTTTGAATCTGTAGTGGGTCTCAGTGCCGCCACCCCCTACACCTCCTTAGCTTTGAAGACCGTCTCTAGGCACTTCCGATGCTTGAAGAATGCCATATCAGATAAGCTCCGGCACATAAGCAAGGCCTTGGGGGAGGAGTTGCCGTCCCCTACCACTGTTACTAGTAGTACTAAAGGCGAGACAACACCACCAAGGCTAAGGTTTATTGATCAGGGCCTCCAGAACCAGAAGGGCGGTGGGGACAGTCTGGGCTTCTTTGAACGCCAACAACACGTCTGGAGACCCCATAGAGGCCTCCCAGAACGTTCAGTTGCTGTTCTAAGAGCCTGGTTGTTCGAGCATTTCCTTCACCCGTTAGTCTCTTTCCCTTTCTAA 795 0.4818 MHARGCTGPLGPFTGYATILKSSKYLKPAQQLLDEFCSVNGSKLVKTCELSKKGSGDVSQSSDPMNTENEVGVRDKNSGISSSSFYSSNETGGQGGVGSRSCQSFQPEFQQRKAKLTYMLEEVCRKYKQYHQQMQMVVSSFESVVGLSAATPYTSLALKTVSRHFRCLKNAISDKLRHISKALGEELPSPTTVTSSTKGETTPPRLRFIDQGLQNQKGGGDSLGFFERQQHVWRPHRGLPERSVAVLRAWLFEHFLHPLVSFPF* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01488 264 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 14 258 - -
Eupl01g01488 264 Pfam Associated with HOX 19 173 IPR006563 -
Eupl01g01488 264 SMART prehox3 14 174 IPR006563 -
Eupl01g01488 264 MobiDBLite consensus disorder prediction 53 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01488 Eupl-Chr1 35689245 35696106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01488 8 258 Homeobox Transcription Factor Family AT2G27990 41.036 9.78e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01488 - - nnu:104595059 355.14