Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01484 ATGAGTATAGAGAGGGTTAATATCTGTTTGATTCCGTCCGTTTTCGTTTTTGTATTCGTTCTTTCAAGTTTTTCTCCGTGCGTGCGATGCCAAGATGCGGACAATTTCAGTCAGACGGGTAATCCTGCGTTGATTCCTATCATCTCGGACCTTGTCTATAAGCGGCTCTGGAACCTCACAGCTATATTTCATAGTGAGATCTCTCATAGTCTGAAGTTCTGCATAAAGGATGTGGAATCTGATTGGAATGGGGCATTCAATTTTTCGTCAAATTTGGGATTCTTATCTTCTTGCATTCGGAAAACGAAAGGAGATCTCACTCAACGCATCTGTACAGCAGCGGAAATGAAGTTCTACTTCAACGGTTTATTTGAAATGGGGTCAAAGAGTACCAACTACTTGAAGCCTAACAAGAACTGTAACTTGACTTCATGGCTTCCTGGATGTGAGCCAGGATGGGCTTGTAGTGTTGGTGCAAATGAGAAGGTTGAGCTCAAAAATTCAAAGGTCATACCTGCTAGAACCCGTGACTGTCAGGCTTGTTGTGAGGGTTTCTTTTGTCCTCATGGTCTTACTTGCATGATACCTTGCCCGTTAGGTGCTTACTGTCCACTTGCAAAACTCAACAAAACTACTGGAATATGTGACCCATATCGCTACCAATTACCTCCTGGAAAGAACCATACTTGTGGTGGAGCAGATGTTTGGGCTGATGTTTTGAGTAGTAGTGAGGTATTCTGTTCAGCAGGATCATATTGTCCTACTACTACCCAAAAAATTCCTTGCAGTAGGGGACATTACTGCAGAATGGGTTCGACATCTGAAAAACGTTGCTTCAAGTTGACTACTTGTAATTCAAATACCGCAAATCAAAATATTCATGCATATGGCATCATGCTTATTGCTGGGTTGAGTACTTTGCTACTCATCATCTATAACTGTTCTGACCAAGTTCTCACCACTCGGGAAATAAGACAGGCCAAATCCAGGGAAGCAGCGGCAAGGAGCGCTAGAGAAACTGCACAAGCACGTGAAAAGTGGAAATCTGCAAAAGATGTTGCTAAGAAGCATGCTATTGGACTGCAAGCACAGTTATCACGTACATTTTCTCGTAAAAAATCTGTAAGGCAACCGGAGCCAATGAAGGTTCTGGGTCAAACTAGAACTGGACCAGATGGTGCTTTATTGCCACCAATGCCTCCAAATGCTTCTAGTGCATCCCAACAATCATCTGCAGCATCAAAGAAAAAGAAAAAGGAACCAAGTAACCTCACAAAGATGATACATGCACTTGAGGAGGACCCTGATAGTAATGAAGGCTTCAACATGGAAATTGGAGATAAAAATATTAAAAAGAACATGCCTAAAGGTAAACAAATGCATACTCATAGCCAAATTTTCAAGTATGCATATGGCCAACTTGAGAAAGAGAAAGTCCTGCAGCAACAGAACAAGAACTTGACCTTTTCAGGAATAATTTCAATGGCTACTGATACTGAGATCAGGACCAGACCTGTGATTGAGGTTGCTTTCAAAGATCTAACTCTTACTCTGAAAGGAAAGAACAAACATCTATTGAGGTGTGTAACGGGTAAAATTATGCCTGGTCGTGTTTCTGCTGTCATGGGCCCATCTGGGGCTGGAAAAACAACATTTCTTTCTGCTCTGGCCGGAAAAGCAACTGGATGCACAATGACTGGTTTAATTTTTATAAATGGAAAGGCTGAATCCATCCACTCATATAAGAAGATTATTGGTTTTGTGCCACAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAGAATCTCTGGTTCAGTGCAAGGTGCAGACTATCCGCTGACTTGTCAAAACCGGATAAGGTTCTAGTTGTTGAAAGAGTTATTGAGTCCTTGGGGCTACAAGCAGTACGGAATTCCTTGGTTGGAACAGTAGAGAAGCGAGGAATCTCTGGAGGCCAAAGGAAGCGAGTAAATGTTGGGCTGGAAATGGTCATGGAACCTTCGCTGCTGATTTTAGACGAACCCACATCGGGTCTGGACAGTTCGTCTTCTCAGTTGCTTCTTAGAGCACTTCGTCGTGAGGCTCTCGAAGGAGTTAACGTCTGCATGGTGGTTCACCAACCGAGCTATAGCTTATTCAAGATGTTTGACGATTTAATACTTCTAGCCAAAGGTGGTCTTACTGTGTACCATGGATCAGTGAAGAAAGTTGAAGAATACTTTGCAGGCCTTGGGATCAATGTCCCTGAGCGTGTTAATCCTCCAGACCACTTCATTGACATTCTGGAGGGTATAGTAAAACCAAGCACAAGCACGAGCGTGAGTTATAAACAACTTCCCATCAGATGGATGCTTCACAATGGGTACCCAATACCCCCGGATATGCAACAAAACGCTATTGGCATTGCTTCGTCCTCAAAGGGAGAAAGTCCAAGTAATGGAACAGATCCTGCTGGTGTTGGATTTGAAGAACAATCTTTTGCTGGAGAGTTATGGCAGGATGTCAAGTGTACTGTCGAGCTCAAGCGGGAAACTATCCAACATAATTTTTTAAAGTCCCACGACTTATCCAACCGGATAACTCCTGGTGTGTTCCAGCAATACAAATACTTCCTTGGGAGGGTTGGTAAGCAACGACTACGAGAAGCTAGAATACAGGCAGTGGATTTTCTGATCTTATTACTTGCTGGAGCATGCTTAGGGACACTTGCTAAAGTGAGTGATGAAACCTTTGGGGCGCTAGGTTACACCTATACTGTCATTTCAGTTTCTCTCCTATGCAAAATTGCGGCTTTGAGGTCATTTTCTTTGGACAAAGTAATTTACTGGAGAGAGAGGGCTTCTGGAATGAGCAGCCTGGCTTATTTTCTTTCGAAGGATACAATTGACCATTTCAATACAGCTATCAAGCCTCTGGTTTATCTCTCCATGTTCTATTTCTTCAACAACCCTAGGTCTTCCTTCACAGATAATTACATTGTTTTGGTCTGCCTTGTGTACTGTGTGAATGGTATTGCCTATGCATTTGCCATCTTCCTCGAACCCAGTCCAGCTCAACTGTGGTCAGTGCTTCTTCCTGTTGTTTTGACTCTAATTGCACAACAGCAACGTGGAATTCTGAAGAGTCTTGCTAACTTGTGCTATACAAAGTGGGCTTTGGAGGCATTTGTGATAGCAAATGCTGAAAGGTACTCTGGAGTGTGGCTGATAACGCGTTGTGGCTCACTCAAAAGCAGTGGATATGATCTTGATGAGTGGAGTCTTTGTATATCCATCCTCATCCTCAATGGTATAGTTAGTCGCGTCATAGCTTTCTTTTGTATGGTGACCTTCCAAAAGAAGTGA 3348 0.4292 MSIERVNICLIPSVFVFVFVLSSFSPCVRCQDADNFSQTGNPALIPIISDLVYKRLWNLTAIFHSEISHSLKFCIKDVESDWNGAFNFSSNLGFLSSCIRKTKGDLTQRICTAAEMKFYFNGLFEMGSKSTNYLKPNKNCNLTSWLPGCEPGWACSVGANEKVELKNSKVIPARTRDCQACCEGFFCPHGLTCMIPCPLGAYCPLAKLNKTTGICDPYRYQLPPGKNHTCGGADVWADVLSSSEVFCSAGSYCPTTTQKIPCSRGHYCRMGSTSEKRCFKLTTCNSNTANQNIHAYGIMLIAGLSTLLLIIYNCSDQVLTTREIRQAKSREAAARSARETAQAREKWKSAKDVAKKHAIGLQAQLSRTFSRKKSVRQPEPMKVLGQTRTGPDGALLPPMPPNASSASQQSSAASKKKKKEPSNLTKMIHALEEDPDSNEGFNMEIGDKNIKKNMPKGKQMHTHSQIFKYAYGQLEKEKVLQQQNKNLTFSGIISMATDTEIRTRPVIEVAFKDLTLTLKGKNKHLLRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKATGCTMTGLIFINGKAESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLSKPDKVLVVERVIESLGLQAVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNVCMVVHQPSYSLFKMFDDLILLAKGGLTVYHGSVKKVEEYFAGLGINVPERVNPPDHFIDILEGIVKPSTSTSVSYKQLPIRWMLHNGYPIPPDMQQNAIGIASSSKGESPSNGTDPAGVGFEEQSFAGELWQDVKCTVELKRETIQHNFLKSHDLSNRITPGVFQQYKYFLGRVGKQRLREARIQAVDFLILLLAGACLGTLAKVSDETFGALGYTYTVISVSLLCKIAALRSFSLDKVIYWRERASGMSSLAYFLSKDTIDHFNTAIKPLVYLSMFYFFNNPRSSFTDNYIVLVCLVYCVNGIAYAFAIFLEPSPAQLWSVLLPVVLTLIAQQQRGILKSLANLCYTKWALEAFVIANAERYSGVWLITRCGSLKSSGYDLDEWSLCISILILNGIVSRVIAFFCMVTFQKK* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01484 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 731 IPR027417 -
Eupl01g01484 1115 Pfam ABC-2 type transporter 707 1115 IPR043926 GO:0140359
Eupl01g01484 1115 CDD ABCG_EPDR 507 733 - -
Eupl01g01484 1115 FunFam ABC transporter G family member 24 503 745 - -
Eupl01g01484 1115 MobiDBLite consensus disorder prediction 368 423 - -
Eupl01g01484 1115 Gene3D - 498 748 IPR027417 -
Eupl01g01484 1115 SMART AAA_5 535 727 IPR003593 GO:0016887
Eupl01g01484 1115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 249 1102 - -
Eupl01g01484 1115 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 509 751 IPR003439 GO:0005524
Eupl01g01484 1115 Pfam ABC transporter 529 678 IPR003439 GO:0005524
Eupl01g01484 1115 ProSitePatterns ABC transporters family signature. 650 664 IPR017871 GO:0005524|GO:0016887
Eupl01g01484 1115 MobiDBLite consensus disorder prediction 330 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01484 Eupl-Chr1 35606612 35646621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01484 536 739 Calmodulin-binding Proteins AT2G36910 25.561 1.73e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01484 - - tss:122651698 1807.34