Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01483 ATGGGAGGAGCTATGAAGTGTTTCAAATTCTCTAATGGAGTGAAGAAGGATGAACTGAAGACTACAAAGTCCACGTCAGTTCGGTCCTCAACTTCTATATCAACTGATCGCGAGGTGAGGAGATCTGGGTCTGAGTTCAATTCTCAGAATGTCTCGGACATGAGTGCTGAATCCGCGGGGAGGACACCGTTTCCGAATCTGTCTCAGAGACCCAACAATCTCAGAGTGTTCACATTTTTGGAGCTGAAGTCTGCCACGAAGAATTTTAGCCGCTCCGTCATGATCGGAGAGGGTGGGTTCGGGTGTGTTTATAGGGGTATGATCAGGAGTTTGGAAGATCCACATACCAAACTCGACATTGCTGTCAAACAGTTGGGCAGAAGAGGATTGCAGGGGCACAAGGAATGGGTGACAGAAGTACATGTCCTTGGGGTGGTTGAACATCCAAACCTTGTCAAACTAGTGGGCTATTGTGCCGAGGACGATGAAAGAGGAATCCAGCGGCTTCTAGTTTATGAATATATGCCCAACAGAAGCGTGGAGGACCATTTGTCAGCTAAGTCAACCACACCTCTTCCATGGGCCATGAGACTGAGAATAGCCCAGGATGCTGCTCATGGGTTAGCATATCTACATGAAGAAATGGATTTTCAGATCATCTTCAGAGATTTTAAACCTTCAAATATTCTCTTAGATCATGAATGGAATGCAAAGCTGTCAGACTTCGGTTTGGCCAGGCAGGGGCCATCGGAAGGATTAAGTCATGTCTCAACAGCGGTTGTAGGAACCATCGGATACGCGGCTCCTGAATATATCCAAACCGGCCGCCTTACAACCAAGAGCGATGTATGGAGCTACGGAGTCGTCCTTTACGAACTCATCACTGGTAGGCCCCCACTGGACCGAAACCGTCCTAAGAGTGAACAGAAGCTCTTGGAATGGATTAGACCTTACCTATCAGACATGAAGAAATTCCGACTGATATTGGATCCAAGGCTCGATGGTAAGTACTGCCTCAAGTCTGCGCAGAAGCTTGCTGCCGTGGCCAACCGGTGCTTGGTACGGCATCCAAAGACACGCCCCAAGATGAGTGAGATATTAGAGATGGTGAAGCGGATCCCAGAGGCAATAGAAATGGGGACCCCTCAACGCCCCATAAAGAATCTGGATCCAAAGGATGCTTCCAAAGAAACAAAAAGAAAAGGGTCCACTTTGAAGAGGATTGCAGATTCGAGAATCGCAGAAGGAGGATGGTTGGTTTGGCGAGGCTGGACACCGAAGCTCGTAAGGACGCGCTGA 1299 0.4842 MGGAMKCFKFSNGVKKDELKTTKSTSVRSSTSISTDREVRRSGSEFNSQNVSDMSAESAGRTPFPNLSQRPNNLRVFTFLELKSATKNFSRSVMIGEGGFGCVYRGMIRSLEDPHTKLDIAVKQLGRRGLQGHKEWVTEVHVLGVVEHPNLVKLVGYCAEDDERGIQRLLVYEYMPNRSVEDHLSAKSTTPLPWAMRLRIAQDAAHGLAYLHEEMDFQIIFRDFKPSNILLDHEWNAKLSDFGLARQGPSEGLSHVSTAVVGTIGYAAPEYIQTGRLTTKSDVWSYGVVLYELITGRPPLDRNRPKSEQKLLEWIRPYLSDMKKFRLILDPRLDGKYCLKSAQKLAAVANRCLVRHPKTRPKMSEILEMVKRIPEAIEMGTPQRPIKNLDPKDASKETKRKGSTLKRIADSRIAEGGWLVWRGWTPKLVRTR* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01483 432 MobiDBLite consensus disorder prediction 44 67 - -
Eupl01g01483 432 ProSiteProfiles Protein kinase domain profile. 89 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01483 432 ProSitePatterns Protein kinases ATP-binding region signature. 95 123 IPR017441 GO:0005524
Eupl01g01483 432 MobiDBLite consensus disorder prediction 19 67 - -
Eupl01g01483 432 Pfam Protein kinase domain 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01483 432 MobiDBLite consensus disorder prediction 389 403 - -
Eupl01g01483 432 CDD STKc_IRAK 95 373 - -
Eupl01g01483 432 SUPERFAMILY Protein kinase-like (PK-like) 63 370 IPR011009 -
Eupl01g01483 432 MobiDBLite consensus disorder prediction 381 403 - -
Eupl01g01483 432 FunFam Serine/threonine-protein kinase BIK1 57 174 - -
Eupl01g01483 432 Gene3D Phosphorylase Kinase; domain 1 69 174 - -
Eupl01g01483 432 Gene3D Transferase(Phosphotransferase) domain 1 175 390 - -
Eupl01g01483 432 PANTHER OS01G0588500 PROTEIN-RELATED 36 373 - -
Eupl01g01483 432 FunFam Serine/threonine-protein kinase PCRK2 175 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01483 Eupl-Chr1 35588596 35594382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01483 72 416 Glycoside Hydrolase AT3G07070 46.705 1.57e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl01g01483 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01483 - - nnu:104586354 682.174