Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01480 ATGGTTTCAGAACTGATTCTCCATAACACTTCTTCCGATCAACCAAACCCGATCTCTGCGATTACAATCGGTTCCTCAAAGACCCAAATCGCTATCCCAAGCAATACTTCTTCTTCAAGAGACCGGCACACAAAGGTTAACGGCCGAGGTCGTCGTGTCCGTATGCCTGCCCTGTGCGCCGCTCGCATCTTTCAACTCACTCGCGAGCTTGGCCACCGCTCCGACGGCGAAACTATAGAATGGCTGCTTCACCAGGCTGAGCCATCCATCATTGCCGCTACCGGCACCGGCACTGTCCCCGCCGCCTCTGTCTCCACCACTGCAGGTCCGATCCCTTCTTCTTCTTCTTCTCCTCCCTCTTCGTCTTCCTCTGCTTCTTCGTCTACTTCTACTAATTGTCAGACTCGGCCGGTTCAAGCCGTGCCCGAGAACCGGGGCCCGGCCGCGTTCTTTGCAGTTTCGAGGTTCGAACCCGCGCCCGCGATCTGCCGGCTCGATTTGTGCCAGCCTGTTGGATTAGAATTCTCCCAATGTAGTGGATATCGGCACATGCCGTTCACGGCAATGTTGTTGCAGCCGGCGACGGAGGACGGGGAGGAGCCGCATCAGCAAGTTCTTCAAGAATAA 627 0.5582 MVSELILHNTSSDQPNPISAITIGSSKTQIAIPSNTSSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLHQAEPSIIAATGTGTVPAASVSTTAGPIPSSSSSPPSSSSSASSSTSTNCQTRPVQAVPENRGPAAFFAVSRFEPAPAICRLDLCQPVGLEFSQCSGYRHMPFTAMLLQPATEDGEEPHQQVLQE* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01480 208 MobiDBLite consensus disorder prediction 101 141 - -
Eupl01g01480 208 Pfam TCP family transcription factor 38 130 IPR017887 -
Eupl01g01480 208 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Eupl01g01480 208 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 143 IPR005333 GO:0003700
Eupl01g01480 208 MobiDBLite consensus disorder prediction 30 49 - -
Eupl01g01480 208 MobiDBLite consensus disorder prediction 101 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01480 Eupl-Chr1 35521765 35522877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01480 39 195 TCP Transcription Factor Family AT2G37000 52.866 6.50e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl01g01480 TCP 3.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01480 - - ming:122086136 236.498