Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01457 ATGGTTTCGGACGCGAGCAAGAAGAAGGCGGCACAGAAGAAGGCCGCGGCGGCTGCGAAGAGGGGAGGGAAGTCTGCTGCCGCAGCATCGTCCAAGTCGGTAGCGGCCGATTTGCAGAACGGAAGCGGTGTTGATAAGTTGTCTAATGGAGTCGGTTCTCTGCAGATATCGGATCGAACGTGTACTGGTGTGCTATGTTCTCATCCTCTCTCGAGAGACATTCGCATAGAGTCTTTATCCGTTACCTTCCATGGTCATGATCTCATAGTGGATTCGGAACTGGAACTTAACTATGGAAGACGCTATGGTTTGCTTGGACTGAATGGCTGTGGGAAGTCGACACTCCTTACAGCAATCGGGTGTCGAGAGCTGCCCATTCCGGAACAAATGGACATCTATCACCTCAGCAGGGAGATTGAAGCTTCTGACATGTCTGCACTCGAGGCTGTTATAAGCTGTGATGAGGAGAGGCTTCAATTGGAGAAAGAAGCAGAAGCTTTGGCAGCAGAGGACGGTGGTGGTGGCGAAGCCCTGGAACGCATTTATGAGCGCTTGGAAGCCTTGGATGTAGCTACTGCTGAGAAGCGTGCGGCCGAGATCTTGTTTGGTCTTGGTTTCAACAAGAAGATGCAAGCAAAGAAAACTCGAGATTTCTCTGGTGGCTGGCGAATGAGGATCGCGCTGGCACGAGCCTTGTTCATGAACCCAACCATCCTTTTGCTTGATGAACCCACAAACCATCTCGATTTAGAAGCCTGCGTCTGGTTGGAGGAGATGTTGAAGAACTTTGACCGCATCCTGGTCGTGGTGTCACACTCCCAGGATTTCCTGAATGGTGTCTGCACAAACATCATACACATGCAGAGCAAGAAGGTGAAGATCTACACAGGTAACTACGACCAGTATGTGCAGACCCGTTCAGAGCTTGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAGGAACAGATCTCATCGATGAAAGAGTATATTGCTCGTTTCGGGCATGGGTCTGCAAAGCTGGCCCGCCAGGCACAGAGCAAGGAGAAAACATTGGCGAAGATGGAGCGAGGTGGGCTCACAGAGAAGGTGGCGAGGGACAAGGTTCTGGTCTTCCGTTTCACCGATGTGGGGAAGCTTCCTCCACCAGTCCTGCAGTTTGTGGAGGTCACATTTGGCTACACACCTGAGAATCTCATATACAAAAATATCGACTTCGGGGTGGACTTGGACTCAAGGATAGCTTTGGTGGGGCCCAATGGGGCTGGGAAGAGCACGCTGCTGAAGCTGATGACAGGGGATCTGGTTCCTCTTGATGGCATGGTTCGGCGGCACAACCACCTGAGGATCGCACAGTTCCATCAGCACTTGACTGAGAAGCTTGACATGGAGATGTCTGCACTCCAGTTCATGTTGAGGGAGTACACGGGCAATGAAGAAGAGAAAATGAGGGCTGCGATCGGGAAGTTTGGACTGACGGGGAAAGCACAGGTGATGGCGATGAAGAACTTATCAGATGGGCAGAGGAGTCGGGTGATTTTTGCATGGTTGGCATGGAGGCAACCACACATGCTGCTGCTGGATGAGCCTACGAACCATCTAGACATAGAGACAATTGACTCACTGGCAGAGGCGCTGAATGAGTGGGATGGTGGCTTGGTTCTTGTTAGTCATGACTTCAGGCTCATCAACCAGGTGGCCCAAGAGATTTGGGTGTGTGAGAACCAGACCGTGACTCAGTGGAAGGGCGACATTATGGACTTCAAGGCGCATCTCAAGAGCAAGGCCGGTTTATCTGATTGA 1803 0.5153 MVSDASKKKAAQKKAAAAAKRGGKSAAAASSKSVAADLQNGSGVDKLSNGVGSLQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEQMDIYHLSREIEASDMSALEAVISCDEERLQLEKEAEALAAEDGGGGEALERIYERLEALDVATAEKRAAEILFGLGFNKKMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEEMLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKKVKIYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARDKVLVFRFTDVGKLPPPVLQFVEVTFGYTPENLIYKNIDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDMEMSALQFMLREYTGNEEEKMRAAIGKFGLTGKAQVMAMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCENQTVTQWKGDIMDFKAHLKSKAGLSD* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01457 600 CDD ABCF_EF-3 385 577 - -
Eupl01g01457 600 ProSitePatterns ABC transporters family signature. 218 232 IPR017871 GO:0005524|GO:0016887
Eupl01g01457 600 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 46 595 - -
Eupl01g01457 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 600 IPR003439 GO:0005524
Eupl01g01457 600 Gene3D - 348 598 IPR027417 -
Eupl01g01457 600 Pfam ABC transporter 92 246 IPR003439 GO:0005524
Eupl01g01457 600 Pfam ABC transporter 401 532 IPR003439 GO:0005524
Eupl01g01457 600 Gene3D - 74 338 IPR027417 -
Eupl01g01457 600 FunFam Abc transporter f family member 1 74 338 - -
Eupl01g01457 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 321 IPR027417 -
Eupl01g01457 600 CDD ABCF_EF-3 74 291 - -
Eupl01g01457 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 314 IPR003439 GO:0005524
Eupl01g01457 600 SMART AAA_5 98 300 IPR003593 GO:0016887
Eupl01g01457 600 SMART AAA_5 410 577 IPR003593 GO:0016887
Eupl01g01457 600 FunFam ATP-binding cassette sub-family F member 3 345 599 - -
Eupl01g01457 600 Pfam ABC transporter 285 363 IPR032781 -
Eupl01g01457 600 Coils Coil 150 170 - -
Eupl01g01457 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 581 IPR027417 -
Eupl01g01457 600 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01457 Eupl-Chr1 35275975 35281188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01457 385 580 Calmodulin-binding Proteins AT2G36910 24.229 1.99e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01457 K06185 - mof:131147918 1036.56