Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01451 ATGTCACAAGATTCTCAGGAGATAAAGACGGTAGAGCAGTGGAGATGGTCCGAAATGCAGGGGCTCGAGCTCGTGTCGGCCGAGACAAGAGGATATAAAGGAGGAGAAGCAGAAGAAGAATCGTCGCACATAAAAACCGAAGTGGGAGAAGAAACTGGTGTGAATAGTGGAGATATAATGGAGGCTTCTGAGGGAAAGAAGAAAGATGTTGAGGAAGAGAAGCCTGGTTCGGTTCCTTCTGTGGGATTCCGAGAGTTTTTTAGATTTTCAGATAGGTTGGATTGTGTTTTAATGGCGGTTGGGACAGTGGGAGCGATTGTTCACGGCTGCTCTCTACCGTTGTTTCTTCGGTTCTTCGCTGATCTTGTGAATTCTTTTGGGTCCAATGCTAACGATATTGATAAGATGACGCAGGAAGTTTTGAAGTACGCATTTTATTTTCTTGTGGTGGGTGCGGCAATTTGGGCGTCTTCGTGGGCAGAGATATCATGTTGGATGTGGACGGGAGAGCGGCAATCGACCAAGATGAGGATCAAGTACCTGGAAGCTGCTTTGAACCAGGATGTTCAGTTCTTTGACACAGAGGTTCGGACCTCCGACGTAGTTTTTGCCATTAACACAGATGCCGTGATGGTCCAAGACGCCATTAGCGAGAAGTTGGGTAATTTTATCCATTACATGGCGACCTTTGTGTCTGGATTCGTGGTGGGTTTCACTGCTGTGTGGCAATTAGCCCTCGTCACACTCGCTGTTGTTCCTCTCATTGCTTTGATTGGAGGCATCCATACGACCACATTAGCCAAACTGTCCTCCAAAAGCCAGGAATCTCTTTCACAAGCAGGAAACATTGCAGAACAGACAATAGTTCAAATCCGGACGGTTTTTTCCTTTGTCGGGGAATCAAGAGCGTTGCAGGCTTACTCCTCTGCATTGAGAATCGCTCAAAGGATTGGGTACAAGATCGGATTCGCAAAGGGAATTGGATTGGGTGCGACGTACTTCACTGTTTTTTGCTGCTATGCCCTTTTACTCTGGTACGGGGGTTATCTAGTTAGACACCACTATACCAATGGAGGACTCGCAATAGCTACCATGTTCGCTGTTATGATTGGTGGACTGGCACTAGGACAATCGGCCCCGAGCATGACTGCCTTTGCTAAGGCAAAAGTTGCAGCTGCCAAGATTTTTCGAATTATCGATCACAAACCTAGTATCGACCGAAACGCTGAATCGGGTGTGGAGTTGGATTCGGTTACTGGTCATTTAGAGTTGAAAAACGTCGAGTTCTCATACCCATCAAGGCCAGATGTTCGAATCCTCTGTGACTTCTCTTTAAATGTTCCGGCGGGGAAGACTATAGCTTTAGTAGGTAGTAGTGGCTCTGGTAAGAGCACTGTTGTCTCCCTCATTGAAAGATTCTATGATCCCACTTCAGGACAAGTTCTGTTAGATGGGCATGACATTACGACATTAAAATTACGATGGCTGAGGCAACAGATAGGGCTTGTGAGCCAAGAACCTGCTCTGTTCGCGACCACCATTAAAGAAAACATACTGTTGGGTAGGCCCGACGCTACCCAAGTTGAGATCGAAGAGGCAGCCAGAGTCGCGAATGCTCACTCTTTTATTGGAAAGCTTCCTGAAGGCTACGACACACAGGTAGGGGAGAGAGGGTTGCAGCTCTCTGGAGGGCAGAAGCAGAGGATTGCTATAGCAAGGGCAATGCTGAAGAACCCAGCAATTCTGCTCTTGGACGAGGCTACGAGTGCACTGGACTCAGAGTCGGAGAAGCTGGTGCAGGAGGCCCTTGATCGCTTCATGATTGGGAGGACAACTCTTGTCATTGCTCACCGCCTCTCCACTATCCGCAAGGCTGACCTTGTAGCTGTCCTCCAGCAGGGGAGTGTGTCTGAGGTTGGGACCCATGACGAACTCATCACAAAAGGCGATAATAGTATCTATGCTAAGCTAATTCGCATGCAGGAGATGGCACATGAAACTGCTCTCAACAATGCCAGAAAGAGCAGTGCTAGGCCTTCTAGTGCCAGAAACTCAGTAAGCTCGCCGATCATTGCCCGGAATTCATCGTATGGCCGATCTCCATACTCCCGCCGGCTCTCTGACTTCTCAACCTCTGACTTTAGCCTCTCCCTTGATGGTACCCACCCCAATTACCGGCTTGAGAAGCTTGCCTTCAAAGAACAGGCCAGCTCTTTCTGGCGCCTTGCCAAGATGAACTCCCCTGAATGGGCTTATGCCCTTATTGGTTCAGTTGGCTCTGTTGTGTGTGGCTCCATTAGTGCCCTCTTCGCCTATGTCCTCAGTGCTGTTCTCAGCGTCTACTACAGCCAAGACCATGCTTACATGCGCCGAGAGATTGGGAAGTACTGCTACTTATTGATTGGGGTTTCGTCAGCGGCGCTCCTCTTCAACACATTACAACATTTCTTCTGGGATGTTGTGGGGGAGAATCTTACAAAGCGGGTGAGAGAGAAGATGCTGGCAGCAGTACTGAAGAATGAAATGGCATGGTTTGATCGCGAGGAGAATGAGAGCGGTAGGATTGCAGCGAGGCTGGCACTTGATGCGAACAACGTCCGATCAGCAATCGGGGACCGTATTTCAGTGATCATGCAAAACTCAGCTCTCATGCTCGTTGCCTGCACAGCAGGTTTTGTACTGCAGTGGCGACTTGCCCTTGTCCTCGTTGCTGTCTTCCCTGTTGTCGTTGCCGCCACTGTTTTGCAGAAAATGTTCATGAAAGGCTTTTCAGGCGACTTAGAAGCTGCTCACGCCAAGGCCACACAGTTAGCTGGCGAGGCCGTGGCTAATGTTAGAACAGTTGCTGCCTTCAATTCGGAGGCAAAGATTGTTGGCATCTTCTCTTCCAGCCTTCAAACACCCCTACGACGCTGCTTCTGGAAGGGACAGATTGCTGGAAGTGGCTTCGGTATAGCTCAATTCTTACTCTATGCATCCTATGCCCTCGGGTTATGGTACGCCTCTTGGCTTGTAAAACATGGTATCTCTGACTTCTCCAAGACGATCCGCGTATTCATGGTCCTTATGGTGTCTGCCAATGGCGCTGCTGAGACACTGACCCTTGCTCCTGACTTCATCAAGGGCGGTCGCGCCATGCGCTCCGTCTTTGATCTCCTCGACCGCAAGACTGAAATTGAGCCCGATGATTCTGATGCCACTCCTGTCCCTGAACGCCTACGTGGGGATGTTGAATTCAAGCACGTTGATTTCTCCTACCCATCTCGCCCTGACATTCCAGTCTTCCGAGACCTCACCCTCCGAGCCCGTGCAGGCAAGACACTCGCCCTCGTCGGCCCCAGCGGGTGTGGGAAAAGCTCTGTCATTGCACTTGTACAGCGATTTTATGAACCAACATCAGGACGGGTGTTGATTGATGGGAAGGATATTCGTAAATTCAATCTCAAGTCGTTACGACGACACATTGCAATGGTCCCACAAGAGCCATGCCTCTTCGCTGCCACCATACACGACAACATCGCATATGGGCGCGAGTCTGCGACCGAGGCCGAGATCATCGAAGCTGCGACTCTAGCAAATGCTGACAAGTTTATCTCGGCATTGCCTGATGGATACCGAACATGGGTTGGTGAGAGGGGAGTCCAATTATCAGGTGGGCAGAGGCAGAGAATTGCTATAGCACGGGCCTTTATAAAGAAAGCAGAGATAATGCTACTCGATGAGGCCACAAGTGCACTCGACGCCGAGTCGGAGAGATGTGTCCAGGAGGCGCTAGAGCGTGCTTGTTCAGGACGGACGACAATCGTTGTTGCACATCGACTATCGACAATAAGGAACGCCAATGTAATTGCCGTGATTGATGATGGGAAGGTGGCAGAGCAAGGGTCGCATTCACATCTCTTGAATCACTACCCTGATGGGTGTTATGCGCGCATGATACAGTTGCAGCGCTTCACACATGGGCAAGCCGTGGGAAAGGCGTCGGGCTCGACTTCTTCCACACGTGAGGAGAAATGA 4017 0.5004 MSQDSQEIKTVEQWRWSEMQGLELVSAETRGYKGGEAEEESSHIKTEVGEETGVNSGDIMEASEGKKKDVEEEKPGSVPSVGFREFFRFSDRLDCVLMAVGTVGAIVHGCSLPLFLRFFADLVNSFGSNANDIDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDVQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIALIGGIHTTTLAKLSSKSQESLSQAGNIAEQTIVQIRTVFSFVGESRALQAYSSALRIAQRIGYKIGFAKGIGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLALGQSAPSMTAFAKAKVAAAKIFRIIDHKPSIDRNAESGVELDSVTGHLELKNVEFSYPSRPDVRILCDFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDITTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDATQVEIEEAARVANAHSFIGKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEVGTHDELITKGDNSIYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDGTHPNYRLEKLAFKEQASSFWRLAKMNSPEWAYALIGSVGSVVCGSISALFAYVLSAVLSVYYSQDHAYMRREIGKYCYLLIGVSSAALLFNTLQHFFWDVVGENLTKRVREKMLAAVLKNEMAWFDREENESGRIAARLALDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMKGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSEAKIVGIFSSSLQTPLRRCFWKGQIAGSGFGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDSDATPVPERLRGDVEFKHVDFSYPSRPDIPVFRDLTLRARAGKTLALVGPSGCGKSSVIALVQRFYEPTSGRVLIDGKDIRKFNLKSLRRHIAMVPQEPCLFAATIHDNIAYGRESATEAEIIEAATLANADKFISALPDGYRTWVGERGVQLSGGQRQRIAIARAFIKKAEIMLLDEATSALDAESERCVQEALERACSGRTTIVVAHRLSTIRNANVIAVIDDGKVAEQGSHSHLLNHYPDGCYARMIQLQRFTHGQAVGKASGSTSSTREEK* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01451 1338 SUPERFAMILY ABC transporter transmembrane region 84 406 IPR036640 GO:0005524|GO:0016020
Eupl01g01451 1338 Gene3D - 1066 1317 IPR027417 -
Eupl01g01451 1338 Gene3D - 412 662 IPR027417 -
Eupl01g01451 1338 MobiDBLite consensus disorder prediction 32 47 - -
Eupl01g01451 1338 FunFam ABC transporter B family member 1 733 1042 - -
Eupl01g01451 1338 MobiDBLite consensus disorder prediction 27 76 - -
Eupl01g01451 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1068 1316 IPR027417 -
Eupl01g01451 1338 CDD ABC_MTABC3_MDL1_MDL2 423 661 - -
Eupl01g01451 1338 Gene3D ABC transporter type 1, transmembrane domain 1043 1319 IPR036640 GO:0005524|GO:0016020
Eupl01g01451 1338 FunFam ABC transporter B family member 1 412 662 - -
Eupl01g01451 1338 CDD ABC_MTABC3_MDL1_MDL2 1077 1316 - -
Eupl01g01451 1338 Pfam ABC transporter 442 589 IPR003439 GO:0005524
Eupl01g01451 1338 CDD ABC_6TM_Pgp_ABCB1_D1_like 98 383 - -
Eupl01g01451 1338 ProSitePatterns ABC transporters family signature. 561 575 IPR017871 GO:0005524|GO:0016887
Eupl01g01451 1338 Gene3D ABC transporter type 1, transmembrane domain 733 1042 IPR036640 GO:0005524|GO:0016020
Eupl01g01451 1338 MobiDBLite consensus disorder prediction 61 75 - -
Eupl01g01451 1338 FunFam ABC transporter B family member 19 1043 1065 - -
Eupl01g01451 1338 PANTHER ABC TRANSPORTER B FAMILY 60 799 IPR039421 -
Eupl01g01451 1338 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 99 387 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g01451 1338 Pfam ABC transporter 1096 1244 IPR003439 GO:0005524
Eupl01g01451 1338 SUPERFAMILY ABC transporter transmembrane region 741 1061 IPR036640 GO:0005524|GO:0016020
Eupl01g01451 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 661 IPR027417 -
Eupl01g01451 1338 ProSitePatterns ABC transporters family signature. 1216 1230 IPR017871 GO:0005524|GO:0016887
Eupl01g01451 1338 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1077 1313 IPR003439 GO:0005524
Eupl01g01451 1338 Gene3D ABC transporter type 1, transmembrane domain 86 674 IPR036640 GO:0005524|GO:0016020
Eupl01g01451 1338 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 658 IPR003439 GO:0005524
Eupl01g01451 1338 FunFam ABC transporter B family member 1 85 421 - -
Eupl01g01451 1338 FunFam ABC transporter B family member 1 1067 1317 - -
Eupl01g01451 1338 CDD ABC_6TM_Pgp_ABCB1_D2_like 743 1059 - -
Eupl01g01451 1338 Pfam ABC transporter transmembrane region 99 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g01451 1338 Pfam ABC transporter transmembrane region 755 1024 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g01451 1338 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 754 1041 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g01451 1338 SMART AAA_5 1104 1296 IPR003593 GO:0016887
Eupl01g01451 1338 SMART AAA_5 449 635 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01451 Eupl-Chr1 35171913 35177984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01451 70 1337 Calmodulin-binding Proteins AT2G36910 85.973 0.0 2241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01451 K05658 - ming:122057843 2256.1