Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01439 ATGAAGCTCAGCCCATCGATTGTTTGGCGACCCGTTTGGCTGTTCATTGCTTTGGGTTTAGTAGTGATGCTGATTCCCTCTTTAGTTATCTCCACTTGGTACACTACGATCAAACAAGTCGAACACACTGTTAAGTTTGTTTCTGATCATGTCCACAATGAAGCACTGTTGGAGATTGAAACTATAGCAAGATCATTACTTCCGATAAATTCATCGGCGCAGAATTTAGCGAGACTTCTAAGTTCTCTCAATGCAACCCAACTGTCGACTTTCTCTACAATCGAAACGAAGGTGGTGCCAAATCTGTTTTTAGTATTCTCTACGCTTCCATTATCGCAGATTTCTTATATAAGATCAGATGGAATTTTCTTCTCATATTACATTGAAGGAAATCGAACTGTCGCATTGTATGCCAACACTTCATTTGTCGAAGCTACGGCGAATGCCTCTACTGTATACAAGTGGTACACTCAACGAGTAGACCAAAACATTGGGAAGCGATATGGGAAAGTCATTGTATTGAATTCAGTGGTCTCTACTAACTCAATTTGGTTTCAAGAAGCATTGAATAGTACACATGGACATGCTTGGTCGGGGACGGGACGGGGCATAACTCAAGAGCTTCTATTCCTTAGCACAGTTGCTATGGATGGAGGAGGGGTGGTCTCTCTTGGGTTTCCTGTGAAAACGTTTACGGATGTCATTTCGGGTATAATAGACATTCATCAGGGGAGCTTGTATTTGACTACAAAATATGGGAAATTACTCAAACAAACTGGGCCTCTCAACGCCACCATGGTGCTCAATAATGACGCGGTTTCGATTCAATTTATGAAATCCAATGGTGATCGTGCAAAGACTGTTAACATTTCATGCAAGCCCAATGATAACCCATCAAGAGCTTCTGATGTGAAAATCTGGGGAACAAAATATATGATTTATTGTGCACCTTTAAAGATAGCCGGGGTTCAATTGGTTTCTGTACTGGTTTTCCCTCACAAGGAACTAATGAGCCTTATTTATAAGCATAGCCACCTAGCATTGATGTTGTTGTCACTAATGGTTGCATCTGTGGGTCTCTCTGTTACCTTCTTTATGCTTGTAATTATTAGAGCTGCTAGAAGAGAGATGTTCCTCTGTGCTGCACTTATAAAACAAATGGAAGCAACAAAACAAGCAGAAAGGAAGAGTATGAACAAAAGTCTCGCTTTTGCCAGTGCCAGCCATGACGTCCGTACTTCTCTTGCAGCCATCACTGGTGTAATAGAGCTTTGTCGTGAGGAAGTTAATCCAAGATCCGAGTTGGAGATGAATTTGGCACAGATGAACACTTGTGCGGAGGACCTTATAGGAATATTGAACTCTGTTCTTGATACAAGTAAAATTGAAGCTGGAAAGATGCAACTCGAAGAGGAAGAATTTGATTTAGCACAACTCCTCGAGGAGTCAGTTAATATGTTCTATCCCATCGGTATAAAGAAAGGCGTAGACGTGGTCTTGGATCCTTGTGACGACTCAGTTATCAAATCCTCTCATGTTAAAGGAGATCGTGGAAAACTCAAACAAATCCTAAATAACTTACTTAGCAATGCTGTGAAGTTTACATCAGAAGGGCATGTCTCTGTTCGTGCTTGGGTTGAGAAACCAAGTTTAGAAAGCTCAATACTTGCTTCTAACAATGTTGGTCTATGGAGCTGTTTACCAAGGATCCTTCACAAGAACAGTGAATCCTACAATGACTTGAGTTCCCTTCATACAGTTCAACAAAATCGAAATTTTACGAAGTTTGTATTTGAGGTGGACGACACAGGAAAGGGAATCCCAAAGGAAAAACAAAAATCCGTCTTTGAGAACTTTGTTCAAGTCAAAGAAACAGCTCTTGGACAAGGAGGCACTGGCTTGGGACTTGGTATTGTTCAATCTTTGGTACGTCTAATGGGTGGAGAGATCAGAATTATGGACAAGGATCCTTGTGAAAGAGGGACTTGTTTCAAATTCAACATTTTCCTTTCCACATGTGAGACCACATCTAGTACTGTTTCAGAAGGAGAAAACGTCAAATTGCTCGGCAATCAGATCTCAAACGAGTTACGTCAGCATTTGGGGTTAAATATTCGGAATCAGAGCCCCAAGTCAAAAGGTTCACATGTTGTACTCTTGATTCAAGGCAATGAAAGAAGAAGAATCTCCAAGAAATTCATGGAGAACTTGGGCATAAAAGTTTCGATTGTAGATCGATGGGAACATCCTGACCTGACGAGGGTCTATGAAGTGAAATATCTATCATACGTGGCGGAAATGCAGGGGTACGGAAATGCAGGGGTTGACACCATGTACGATGGGATGGTATCAGGTGGGATAATGAGTGGTGTCAAATATCCATTTGATGAAGTGTGA 2397 0.4126 MKLSPSIVWRPVWLFIALGLVVMLIPSLVISTWYTTIKQVEHTVKFVSDHVHNEALLEIETIARSLLPINSSAQNLARLLSSLNATQLSTFSTIETKVVPNLFLVFSTLPLSQISYIRSDGIFFSYYIEGNRTVALYANTSFVEATANASTVYKWYTQRVDQNIGKRYGKVIVLNSVVSTNSIWFQEALNSTHGHAWSGTGRGITQELLFLSTVAMDGGGVVSLGFPVKTFTDVISGIIDIHQGSLYLTTKYGKLLKQTGPLNATMVLNNDAVSIQFMKSNGDRAKTVNISCKPNDNPSRASDVKIWGTKYMIYCAPLKIAGVQLVSVLVFPHKELMSLIYKHSHLALMLLSLMVASVGLSVTFFMLVIIRAARREMFLCAALIKQMEATKQAERKSMNKSLAFASASHDVRTSLAAITGVIELCREEVNPRSELEMNLAQMNTCAEDLIGILNSVLDTSKIEAGKMQLEEEEFDLAQLLEESVNMFYPIGIKKGVDVVLDPCDDSVIKSSHVKGDRGKLKQILNNLLSNAVKFTSEGHVSVRAWVEKPSLESSILASNNVGLWSCLPRILHKNSESYNDLSSLHTVQQNRNFTKFVFEVDDTGKGIPKEKQKSVFENFVQVKETALGQGGTGLGLGIVQSLVRLMGGEIRIMDKDPCERGTCFKFNIFLSTCETTSSTVSEGENVKLLGNQISNELRQHLGLNIRNQSPKSKGSHVVLLIQGNERRRISKKFMENLGIKVSIVDRWEHPDLTRVYEVKYLSYVAEMQGYGNAGVDTMYDGMVSGGIMSGVKYPFDEV* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01439 798 Pfam His Kinase A (phospho-acceptor) domain 402 465 IPR003661 GO:0000155|GO:0007165
Eupl01g01439 798 Coils Coil 462 482 - -
Eupl01g01439 798 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 454 668 IPR036890 -
Eupl01g01439 798 CDD HisKA 400 461 IPR003661 GO:0000155|GO:0007165
Eupl01g01439 798 PANTHER TWO-COMPONENT HISTIDINE KINASE 123 743 - -
Eupl01g01439 798 SMART HKATPase_4 515 672 IPR003594 -
Eupl01g01439 798 PRINTS Bacterial sensor protein C-terminal signature 596 610 IPR004358 GO:0016310|GO:0016772
Eupl01g01439 798 PRINTS Bacterial sensor protein C-terminal signature 630 648 IPR004358 GO:0016310|GO:0016772
Eupl01g01439 798 PRINTS Bacterial sensor protein C-terminal signature 614 624 IPR004358 GO:0016310|GO:0016772
Eupl01g01439 798 SMART HisKA_10 399 465 IPR003661 GO:0000155|GO:0007165
Eupl01g01439 798 Gene3D - 467 678 IPR036890 -
Eupl01g01439 798 Gene3D - 386 466 - -
Eupl01g01439 798 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 668 IPR003594 -
Eupl01g01439 798 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 387 467 IPR036097 GO:0000155|GO:0007165
Eupl01g01439 798 ProSiteProfiles Histidine kinase domain profile. 406 672 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01439 Eupl-Chr1 34952953 34964510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01439 1 749 Histidine Kinase Gene Family AT2G47430 42.839 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01439 - - nnu:104590735 841.262