Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01419 ATGCTCCCCTACCCGCTTCTAGCTTTCAACTACTTAACTGCGACTTCTTTTCTATTTGGAAGGATTTCTCTATGGACATACCCAAAACCACTTTGTTCGAAATGGTTGGTGTCTGAAAAGCCATTTGTTGTCATCACTAATTCTTCATATGTGGATGTGCTCTTTGAGAAACCTAAGATAATGCCAAGGGACGGTGGTGGGAGTGGCTTCTCAGACCTTGAATCTGGGTCCAATTATTCAGGGTCTGAGAAACCACTCCCACCACCGTCCCCTGGCATTATCTTAGGTTTCTCAAAGAGCATATTCACATATGAAGAATTAGCGATGGCAACAGATGGTTTTTCAGACGCCAACCTTCTTAGACAAGATGACTTTGGGTATGTCCACAGAAGAATCTTTTCAAATGGAAAAGAAGTCGCAGTTGATAGCGGGCAATGGGAGCGTGAATTTCAAGCAAAGGTCGAGATTATTAGCAGAGTACATCATAAACATCTTGTGACGTTGGTTGGATACTGCATTACTGGAGCTCAGAGAATGCTTGTTTATGAGTTTGTTCCAAACAACACCTTAGAGTTCCACTTACATGTGTACAAGATAATACTATATGCCAATGGAGCAACATTTATGAATGCGATGTTATGCATAAAACCTCCTTTCTGCAATGGTGGCTCCGGCGATATAGACGGCACTGTGTCCACACTTCTTCTTGTGATTTGGGATGTGAAAGTGGCAGATTTGATTATTAGTCCTGTTCATTTTGCTGCAACTGGTGTTGTGGATCTAAATAAGGTTGCAGCATCTTTCAGTGGCCTAACTTTTGGTGCATGTGGATTAAGGCAGTATGTAGCATTCGCTGGAAGATCCAAGTCAAGGATTTACCCCGGTCATGCATGTGGTCTTTGA 903 0.4252 MLPYPLLAFNYLTATSFLFGRISLWTYPKPLCSKWLVSEKPFVVITNSSYVDVLFEKPKIMPRDGGGSGFSDLESGSNYSGSEKPLPPPSPGIILGFSKSIFTYEELAMATDGFSDANLLRQDDFGYVHRRIFSNGKEVAVDSGQWEREFQAKVEIISRVHHKHLVTLVGYCITGAQRMLVYEFVPNNTLEFHLHVYKIILYANGATFMNAMLCIKPPFCNGGSGDIDGTVSTLLLVIWDVKVADLIISPVHFAATGVVDLNKVAASFSGLTFGACGLRQYVAFAGRSKSRIYPGHACGL* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01419 300 SUPERFAMILY Protein kinase-like (PK-like) 85 200 IPR011009 -
Eupl01g01419 300 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 84 195 IPR047117 -
Eupl01g01419 300 Pfam Protein tyrosine and serine/threonine kinase 147 196 IPR001245 GO:0004672|GO:0006468
Eupl01g01419 300 MobiDBLite consensus disorder prediction 65 87 - -
Eupl01g01419 300 Gene3D Phosphorylase Kinase; domain 1 94 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01419 Eupl-Chr1 34665191 34671417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01419 101 195 Trihelix Transcription Factor Family AT4G32710 64.000 1.13e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Eupl01g01419 PK_Tyr_Ser-Thr 2.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01419 - - qsa:O6P43_007923 196.438