Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01414 ATGCCGATCCATCGGATTGCTGTGGGTAGGCGCGAGGAGGCGACTCATCCTGACGCGTTGAGGGCCGCGTTGGCTGAGTTCATAAGCACACTCATTTTCGTCTTCGCTGGTGAGGGCTCCGGCATGGCTTTTAACAAGCTCACTGACAATGGTGCCACCACTCCGGCAGGCCTCGTTGCCGCCGCGTTGGCCCACGCGTTCGGTCTCTTCGTCGCTGTATCTGTTGGAGCTAACATCTCCGGTGGCCACGTCAACCCCGCTGTGACCTTCGGTGCCTTCATTGGCGGAAACATCACTCTCCTACGTGGCATCCTTTACTGGATCGCTCAGCTCCTCGGTTCCGTCGTTGCTTGCTTGCTGCTTAAATTGGCCACCAACGGCATGACTACTTCGGCGTTTAGTTTGTCTTCTGGAGTGACCGTGTGGAACGCGTTGGTGTTCGAGATCGTGATGACTTTCGGGCTTGTTTACACTGTTTACGCAACCGCCGTTGATCCCAAGAATGGTAGTTTGGGCACGATCGCACCTATTGCCATCGGTTTCGTCGTGGGCGCTAACATTTTGGCTGGTGGGGCCTTCGATGGTGCTTCGATGAACCCGGCCGTGTCGTTTGGACCCGCTGTGGTGAGCTGGAGCTGGGGAAACCACTGGGTCTACTGGCTTGGGCCTTTGATCGGAGGTGGGCTTGCCGGGCTTGTGTACGATTTCTTCTTCATCGACCAAACCCGCCACGAGCAGTTGCCCACCGCAAACTACTAA 759 0.5679 MPIHRIAVGRREEATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTDNGATTPAGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKLATNGMTTSAFSLSSGVTVWNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFVVGANILAGGAFDGASMNPAVSFGPAVVSWSWGNHWVYWLGPLIGGGLAGLVYDFFFIDQTRHEQLPTANY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01414 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 PANTHER AQUAPORIN-8 6 248 IPR034294 -
Eupl01g01414 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Eupl01g01414 252 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Eupl01g01414 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Eupl01g01414 252 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl01g01414 252 SUPERFAMILY Aquaporin-like 12 244 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01414 Eupl-Chr1 34615158 34616348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01414 1 252 Major Intrinsic Protein MIP AT2G36830 83.730 1.70e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01414 K09873 - nnu:104604560 425.631