Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01408 ATGGGAGGCGAAGCAGAAGCAGCAGCAGCAGCAGCAGTAACAGCAACGTCACTCGCTCCAGGTTTCCGGTTCCATCCAACTGACGAAGAACTCGTCAGTTACTATCTCAAGCGCAAGGTCTGCGGAAAGCCCTTTCGGATTGATGCGATATCCGAAATCGATGTCTACAAATCCGAGCCGTGGGATCTTCCAGATCAGTCGCGGCTGAAGAGTAGAGACCTAGAGTGGTATTTCTTTAGTGCCCTAGATAAGAAGTACAGTAACGGATCGAGGACCAACCGCACTACGGACCAAGGGTACTGGAAGACGACCGGGAAGGACCGGCCTGTCCGATGGCGCAATCGGACGGTCGGGATGAAGAAAACCCTTGTGTTTCATATTGGACGGGCTCCGCGCGGAGAGCGCACCAATTGGGTCATGCATGAGTACCGACTCGTCGATGAAGAGTTAGTGAACGCGGGTATCGCGCAGGATGCGTTTGTGCTGTGTAGGATCTTCCGGAAGAGCGGTTCGGGGCCTAAGAATGGTGAGCAGTATGGGGCGCCATTTATTGAGGAGGAGTGGGATGAGAATGTGTTGGTTCCAGAAAGAGAAGCCACGGATGACGCGCTCTGTAATGTTGGCGATGAAGGGTATGTTCAGCAAAACGACAGTGAGCAGAATCTTGCCTTGGTAATTCCACATGTAAATATGGCCCTTCCTGTGGTGTTTGATGCTGGGGATGGTTGCAACCATTTAGAGGGACCCAGGGGCATCCTTGAAGATGATCAAAAGCTTTTAATTGGCGCGAGTGGAAATGTTGATTTGCCAGAACTGCCTGATAGCCTCAAAATCTTTGTCTTACCAGAACAGTATCAGATGGGCCCTGCGGCAGTTAGAGAAGAATATTTTGTCGAACTGGATGATCTTGTAAATCCAGTGGAGGCTAACTACCATGTTGATGACCCAGTTGATGGGGATCTGATGTACTTTGATGCTTCCAATGATCAACCAGTTAACGATGAATCATTCCTGGAAATTTGCGATCTTGTAAACCCCGTTGGGGCAGATCCATCAGGATTTGAAATGCTCAACGAATACCTCACGTACTTTGATGCTACTGATGATAACTTGCATTATGTGGCTAATGAAGATCCTATTTTGGACCAATCAGCCAAAATCCAGGAGGTGAATAGAGGAATCGGACAAGAATATCTGGCATCCACACAGCCCGTAAAAACACATGGTGGTGAAGGTGCATCCTCTTCAAAGCAAACACCGGAGGTCACGAAGCTTGCACCAGATGTCCAATACAGTGAGGGTTGGAATAGTGCCCTTGCCAAACGGGTCAGTCGCATGCTGGGGTCCATCCCTGCTCCTGTTGCATTTGCTGCAGAGTTCCCTACAAAGGAGGCAGCTCTCACACAGAACTCGGCAACACACTCCTCCAGCTCCATCCATGTTACTGCTGAGATGATCCGAATTAGTGACATGACAGTAAGTGGCAGCAGAAATACTGGATCATTGGGGAAGGGTGGAGATGTGAATTTCCTCCTTTCCTATGGCATGACAAGGGGTGATGTGATGGCTAGCGAACACCTGATCAGCAAATCCAGTAGTATAGAACCAATGGCTAACATGTTGTCAAGCAAGGCAGGGTCTATGGTGGTGCGGAGCGGATTCTACCTTATCTTCCTCTGGGTCCTGATTCTTTCAGTGAGCTTCAAAATTGGAAGCTACATTTATATCAGTTGGCTGTAA 1740 0.4897 MGGEAEAAAAAAVTATSLAPGFRFHPTDEELVSYYLKRKVCGKPFRIDAISEIDVYKSEPWDLPDQSRLKSRDLEWYFFSALDKKYSNGSRTNRTTDQGYWKTTGKDRPVRWRNRTVGMKKTLVFHIGRAPRGERTNWVMHEYRLVDEELVNAGIAQDAFVLCRIFRKSGSGPKNGEQYGAPFIEEEWDENVLVPEREATDDALCNVGDEGYVQQNDSEQNLALVIPHVNMALPVVFDAGDGCNHLEGPRGILEDDQKLLIGASGNVDLPELPDSLKIFVLPEQYQMGPAAVREEYFVELDDLVNPVEANYHVDDPVDGDLMYFDASNDQPVNDESFLEICDLVNPVGADPSGFEMLNEYLTYFDATDDNLHYVANEDPILDQSAKIQEVNRGIGQEYLASTQPVKTHGGEGASSSKQTPEVTKLAPDVQYSEGWNSALAKRVSRMLGSIPAPVAFAAEFPTKEAALTQNSATHSSSSIHVTAEMIRISDMTVSGSRNTGSLGKGGDVNFLLSYGMTRGDVMASEHLISKSSSIEPMANMLSSKAGSMVVRSGFYLIFLWVLILSVSFKIGSYIYISWL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01408 579 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Eupl01g01408 579 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Eupl01g01408 579 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Eupl01g01408 579 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 197 - -
Eupl01g01408 579 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Eupl01g01408 579 FunFam Nac domain-containing protein 86 27 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01408 Eupl-Chr1 34522064 34527179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01408 14 570 NAC Transcription Factor Family AT5G04410 43.493 4.15e-139 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl01g01408 NAM 3.1e-36 No_clan