Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01395 ATGGACAACAACCTCAACACTTCAACCAGGAGAAGCAATAACAACTTCTGCTTTTGGCTTTCAGCCATTGTTATTGCTCTACTTTCCATTCTATTTGCTCTCAATTCCATCCCTTCTTCCCCTACTGCTAGTTCTTCTGGTAGTTTTCGAGTAGCCATTGTTGATAGGGTGGTAAAACAAAGTGGCATAGAGGAGTTTGTCTCTCTTGTAAGCCGCATTGTGCAAAGAAAATCGAGACACCATCACCATCGGAGGAGGCGTAAGATCAAATGTGAAAATACCAAATCGACGTCTTGGATTGTGTCTGATTATAATGTGTCGCTCGTCTTGACGGTCGATTTGAAGGGATGTGCAAACTTCAGTAGCGTGCAGAAGGCTGTGGATGCTGTTCCTGATTATAGTCCTACTAGGACCCTCGTCTTAATTGATTCTGGCGTTTACAGGGAGAAGGTAGTTGTTCGCGCTAACAAGACGAATTTGATATTCCAAGGTCAGGGTTATCTCAACACATCCATAGCTTGGAACGACACCGCAAACTCGACAGGAGGGACGGTTTACAGTTCTTCAGTTGCCATCTTTGCTCCCAGCTTCACAGCTTACAACCTTAGCTTTCAGAATACAGCTCCTCCTCCATCTCCTGGTGAAGTTGGTGCTCAAGCAGTAGCACTCAGGATTGCAGGTGACGAAGCTGCATTTTATGGTTGCGGATTCTATGGTGCCCAAGACACACTTCATGATGACCGAGGGAGGCATTATTTTAGAGAATGTTTCATCCAAGGATCCATCGATTTCATCTTTGGGAATGCTAGATCACTCTACGAGGAGTGCACAATTAATTCAATAGCGAAGCCGGTTTCGATGGGGATAAGTGGAGCCATCACAGCTCATGGAAGACAGTCGACGAACGAGAGAACGGGGTTTTCATTCGTGGATTGTAGTATTGGCGGATCAGGAAGGGTGTGGCTCGGACGAGCTTGGGGTTCATATGCTTCCGTCGTCTTCGCGAAAACATACATGTCCGATATCATAGCTTCCGATGGATGGAATGATTGGAATGATCCCTCTAGAGACCAGACCATCTTCTTCGGGGAATACGAATGCATAGGACCGGGAGCAAATTATACGTTCCGATCGTTGTATAGTAAACAGCTGAGTCGTTCTGAAGTAACGCCATACTTGGATGTTTCTTTCATTGAAGGAAACGAGTGGCTTCTTCGCCGTCGAACAATTCGTCCAATCCTCCCGATCATCGTCGACACAGAGAATTCATTCAAGTTAAATAACACTGATTGA 1293 0.4555 MDNNLNTSTRRSNNNFCFWLSAIVIALLSILFALNSIPSSPTASSSGSFRVAIVDRVVKQSGIEEFVSLVSRIVQRKSRHHHHRRRRKIKCENTKSTSWIVSDYNVSLVLTVDLKGCANFSSVQKAVDAVPDYSPTRTLVLIDSGVYREKVVVRANKTNLIFQGQGYLNTSIAWNDTANSTGGTVYSSSVAIFAPSFTAYNLSFQNTAPPPSPGEVGAQAVALRIAGDEAAFYGCGFYGAQDTLHDDRGRHYFRECFIQGSIDFIFGNARSLYEECTINSIAKPVSMGISGAITAHGRQSTNERTGFSFVDCSIGGSGRVWLGRAWGSYASVVFAKTYMSDIIASDGWNDWNDPSRDQTIFFGEYECIGPGANYTFRSLYSKQLSRSEVTPYLDVSFIEGNEWLLRRRTIRPILPIIVDTENSFKLNNTD* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01395 430 Pfam Pectinesterase 111 401 IPR000070 GO:0030599|GO:0042545
Eupl01g01395 430 SUPERFAMILY Pectin lyase-like 107 404 IPR011050 -
Eupl01g01395 430 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 101 404 - -
Eupl01g01395 430 Gene3D - 104 409 IPR012334 -
Eupl01g01395 430 ProSitePatterns Pectinesterase signature 2. 258 267 IPR033131 -
Eupl01g01395 430 FunFam Pectinesterase 104 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01395 Eupl-Chr1 34377241 34380347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01395 103 404 Carbohydrate Esterase AT1G05310 57.705 1.25e-131 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01395 - - vvi:100253851 581.252