Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01385 ATGGAGTCAATGTTGGTTCCCCCATGGCTCGAATCATTACTATCGACTGACTTCTTCTTCGTCTGCCGGACCCACGGAGACGCCGCAAGGAGTGAGTGCAACATGTATTGCCTCGACTGCAATGGCGACGCATTTTGCTTCTACTGCCGATCATCGAGACACAAAGATCATCGAGTAATTCAAATAAGGAGGTCATCATATCACGACGTGGTGCGGGTGTCCGAAATTCAAAAGGTCCTTGACATCGGTGGGGTACAGACTTATGTGATAAACAGTGCTAGAGTTCTGTTCCTCAACGAGAGGCCTCAACCTAAGACGGGTAAAGGGGTGTCTCATATATGCGAAATATGCGGGAGAAGCCTCTTAGACACATTTCGCTTCTGCTCATTGGGTTGTAAGCTAGTTGGAATAAAGAGGAATGGGGATGCAAGCTTTATGTTAGACACAAAGAATGAAGTAATGGAAAGAGGAGAGGGGATATCAAGGAGAGCGTCAAGAGAGGAAGAAGAATTGCGTGAAGGCACACAACACGACATATACCCTCCCACGCCTCCCCCACCTCCTAATCCAAGGCGAAGAAAGGGCATTCCTCATAGGGCACCATTTGGGTCCTAA 615 0.4813 MESMLVPPWLESLLSTDFFFVCRTHGDAARSECNMYCLDCNGDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDIGGVQTYVINSARVLFLNERPQPKTGKGVSHICEICGRSLLDTFRFCSLGCKLVGIKRNGDASFMLDTKNEVMERGEGISRRASREEEELREGTQHDIYPPTPPPPPNPRRRKGIPHRAPFGS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01385 204 MobiDBLite consensus disorder prediction 155 204 - -
Eupl01g01385 204 SUPERFAMILY B-box zinc-binding domain 20 64 - -
Eupl01g01385 204 Gene3D Classic Zinc Finger 20 65 - -
Eupl01g01385 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 202 - -
Eupl01g01385 204 Pfam PLATZ transcription factor 63 134 IPR006734 -
Eupl01g01385 204 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01385 Eupl-Chr1 34282111 34284040 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Eupl01g01385 PLATZ 5.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01385 - - nnu:104586185 344.354