Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01372 ATGTCTCGTCGCGGCGGTGGTCGGAATAAACCGTCACCGGCGTCAGCACCGCCGCCTCAGGTAGGCGGAGGAAGAGGAAGAGGAAGAGGTGGTGGCGCCACCCATGCCTCGGCTGCTCCGCCTTCTACTTCTTCTCCCTCGATCTCAGAAATCGGCTCGTCCTCATCGGCCGCTGCTACTCTAAGCCGCGATGTAGAGGAGCGGTTGACATTGCAAGCACCGGCAACGGCACCGGCACCGGCACAGCCTCCTCCGGCGTCTTCGAAGGCCAACAGGTTTCCGGCGAGGCCGGGGCCTGGTACTGTAGGAAGTAGGTGCGTCGTTAAAGCCAATCATTTCCTGGTCAAGCTTGCTGACAAGGACCTTCACCACTACGATGTCTCAATCAGTCCTGAGGTGATATCCAGAGGTGTCAACAGGGCTGTAATGAATCAGCTTGTTGAAATGTATCGTGAGTCGCACTTGGGGAAGCGACAACCCGCTTATGATGGTCGGAAAAGCCTGTACACTGCGGGGCCTTTGCCTTTTACCTCCAAAGAATTTGTTATCAAGTTAATTGGCAAGGATGAAAAAGGCACTTCTACAGGAAAAGATCGAGAATTTAAGGTGGCTATTAAGTTTGCTTCTCGTGCTGACATCCACCATTTGCAACAATTTTTACATGGCAGACAAATGGATGCACCACAAGAGACCATACAAGTTCTTGATGTGGTTTTGAGAGAATCACCATCCACAAACTATACCGTTGTGGGAAGGTCATTTTTCTCCCCCATATTGGGGCAAAGAGGTGAGATTGGTGATGGTCTGGAATGCTGGAAGGGATTCTATCAAAGTCTTCGGCCAACCCAGATGGGATTGTCCCTAAATATAGATGTTTCGGCCACGTCGTTTTACGAACCTATTAATGTTATTGATTTTGTCATGAAATTTCTCAATATCCGAGATACATCAAGGCCATTGTCTGATACTGATCGTGTTAAGTTGAAGAAGGCCTTAAGAAGAGTTAAGGTTCAGTTGACCTATGGGGAGAAGAAAAGAAGTCACAAGATTTCAGGGATAACAGCTCAACCGACAAGCCAGTTAACGTTTCCAGTCGATGACAAAGGGACAAAGATGTCAGTTGTTCAATACTACCAACAGAGGTATAGAGTTAGGCTGACGCAGGCAAATTGGCCATCCCTTCAAGCTGGAAGTGATGCGCGGCCAATATATTTACCTATGGAGGTTTGCGAAATTGTTGAAGGGCAGAGATTTGGTAAGAAATTGAATGAGAAACAGGTAACTGCGATCTTAAAAGCAACCTGTCAACGTCCACAGCAAAGGGAGAGTAGTATTGAGGGGATGGTTAAGCGCAATGATTACAACAAGGATAAATTTGCAATTGAATTTGGAGTTCAAGTAGAGGGAAAACTTACAGCAGTTGATGCTAGAGTTCTTCCTCCTCCAGTGCTGAAGTATCACGATACTGGTCGAGACGTGAAGATTCATCCTCGTGTGGGGCAATGGAACATGATTAACACGAAAATGGTCAATGGTGGAACAATAGATTCTTGGATGTGTATCAATTTCTCGTCACGGTTGAACCCTGATATTGCCTTTCAGTTTTGTCAAGAACTGGTTGCCATGTGTGCCAGTAAGGGAATGATTTTCAACCCCAGACCTATACTTCCCATGCGTTCTGCTCGGCCCGAACAAATTGAGAAGGTTCTTGTAGAAGCTCACACCCAATCTATTGCGAAACTTTCAAACAGCGGAGTGAAAGGAAAACAACTTCAGCTTTTGATCATTATTCTACCAGATTTTAGTGGCTATTATGGTAGGATAAAACGAATCTGTGAAACGGAGTTGGGAATAGTCTCACAGTGCTGTCAGCCAAGACAGGCTGGCAAGATTAGTAAGCAGTATCTTGAAAATGTGTCCCTCAAGATCAATGTTAAGGCTGGTGGACGGAACACAGTACTGCATGATGCTCTCTTGAGGAAAATTCCTATCGTGTCTAGTGCTCCTACCATTATCTTTGGTGCTGATGTAACCCATCCATCACCAGGAGAAGACTCAAGCCCTTCCATAGCAGCGGTGGTTGCTTCTATGGACTGGCCTGAGATCACAAAATACAGAGGCCTCGTCTCAGCACAAACCCATAGAGAAGAATTGATTCAAGATCTGTTTAAAGTGGTTCAGGATCCTCAGAAGGGTCCTGTTAATGGAGGGATGATCCGGGAACTTTTGATTGCGTTCAGGAGATCAACTGGGCACAAGCCTCATAGGATCATATTCTATAGAGATGGTGTTAGTGAAGGACAGTTCAGTCAAGTTCTACTGTATGAAATGGATGCTATTCGCAGGGCCTGTGCTTCTTTGGAGGAGGGGTATCAACCTCCTGTTACGTTTGTGGTTGTTCAGAAGAGACACCACACGCGGTTATTCCCCGCAAATCATAATAATCGGGATTTGACAGACCGGAGCGGGAACATTTTACCTGGAACTGTTGTGGATACCAAGATCTGCCACCCTACTGAGTTTGATTTTTATCTCTGTAGCCATGCTGGGATTCAGGGTACCAGCAGGCCCACACATTACCATGTTCTGTGGGACGAAAATAAGTTCACCTCGGACATATTACAAATGCTAACGAACAATCTTTGCTACACGTATGCGAGGTGCACCCGTTCAGTGTCCATAGTTCCTCCTGCTTACTATGCCCATTTAGCGGCATTCCGAGCTCGATATTACATCGAGGGTGATGCATCGGACAGTGGATCATCGGCAGCAGGTGGGGGTGGGGGTGCTCCGGGTACGAGGGGGAGAAATGCTGAAGTAAGGCCCCTTCCGCAGATCAAAGAAAATGTTAAAGATGTGATGTTCTACTGCTAG 2874 0.468 MSRRGGGRNKPSPASAPPPQVGGGRGRGRGGGATHASAAPPSTSSPSISEIGSSSSAAATLSRDVEERLTLQAPATAPAPAQPPPASSKANRFPARPGPGTVGSRCVVKANHFLVKLADKDLHHYDVSISPEVISRGVNRAVMNQLVEMYRESHLGKRQPAYDGRKSLYTAGPLPFTSKEFVIKLIGKDEKGTSTGKDREFKVAIKFASRADIHHLQQFLHGRQMDAPQETIQVLDVVLRESPSTNYTVVGRSFFSPILGQRGEIGDGLECWKGFYQSLRPTQMGLSLNIDVSATSFYEPINVIDFVMKFLNIRDTSRPLSDTDRVKLKKALRRVKVQLTYGEKKRSHKISGITAQPTSQLTFPVDDKGTKMSVVQYYQQRYRVRLTQANWPSLQAGSDARPIYLPMEVCEIVEGQRFGKKLNEKQVTAILKATCQRPQQRESSIEGMVKRNDYNKDKFAIEFGVQVEGKLTAVDARVLPPPVLKYHDTGRDVKIHPRVGQWNMINTKMVNGGTIDSWMCINFSSRLNPDIAFQFCQELVAMCASKGMIFNPRPILPMRSARPEQIEKVLVEAHTQSIAKLSNSGVKGKQLQLLIIILPDFSGYYGRIKRICETELGIVSQCCQPRQAGKISKQYLENVSLKINVKAGGRNTVLHDALLRKIPIVSSAPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEITKYRGLVSAQTHREELIQDLFKVVQDPQKGPVNGGMIRELLIAFRRSTGHKPHRIIFYRDGVSEGQFSQVLLYEMDAIRRACASLEEGYQPPVTFVVVQKRHHTRLFPANHNNRDLTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPTHYHVLWDENKFTSDILQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDASDSGSSAAGGGGGAPGTRGRNAEVRPLPQIKENVKDVMFYC* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01372 957 Gene3D - 662 957 IPR036397 GO:0003676
Eupl01g01372 957 Pfam N-terminal domain of argonaute 105 239 IPR032474 -
Eupl01g01372 957 CDD PAZ_argonaute_like 300 413 - -
Eupl01g01372 957 FunFam Argonaute 10 478 655 - -
Eupl01g01372 957 ProSiteProfiles Piwi domain profile. 593 913 IPR003165 GO:0003676
Eupl01g01372 957 SMART PAZ_2_a_3 305 439 IPR003100 GO:0005515
Eupl01g01372 957 Gene3D paz domain 294 418 - -
Eupl01g01372 957 Gene3D - 478 655 - -
Eupl01g01372 957 SUPERFAMILY PAZ domain 107 455 IPR036085 GO:0005515
Eupl01g01372 957 SUPERFAMILY Ribonuclease H-like 586 913 IPR012337 -
Eupl01g01372 957 Pfam Argonaute linker 2 domain 440 486 IPR032472 -
Eupl01g01372 957 MobiDBLite consensus disorder prediction 917 943 - -
Eupl01g01372 957 Pfam Argonaute linker 1 domain 250 299 IPR014811 -
Eupl01g01372 957 Pfam PAZ domain 325 429 IPR003100 GO:0005515
Eupl01g01372 957 CDD Piwi_ago-like 458 912 IPR045246 -
Eupl01g01372 957 MobiDBLite consensus disorder prediction 1 102 - -
Eupl01g01372 957 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 85 914 - -
Eupl01g01372 957 SMART Piwi_a_2 593 913 IPR003165 GO:0003676
Eupl01g01372 957 ProSiteProfiles PAZ domain profile. 301 414 IPR003100 GO:0005515
Eupl01g01372 957 MobiDBLite consensus disorder prediction 37 61 - -
Eupl01g01372 957 FunFam protein argonaute 10-like 661 957 - -
Eupl01g01372 957 Pfam Mid domain of argonaute 496 572 IPR032473 -
Eupl01g01372 957 SMART DUF1785_2 248 300 IPR014811 -
Eupl01g01372 957 Pfam Piwi domain 595 912 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01372 Eupl-Chr1 34034529 34042231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01372 43 957 Eukaryotic Initiation Factors Gene Family AT1G48410 65.767 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01372 K11593 - msin:131223533 1299.65