Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01368 ATGACATCTTCTTCTGACTCATGGATGAGGGAACTCAATGAAGCTTCCAAGCTTGGTGATGATATCAATTCCATGATTTCTGAAAAGGGTTCTTTGCCCCCATCAGGACCGGATACACAACGTCATTTATCTGCAATTCGGAGGAAGATTACAATACTAGGGACGAGACTTGATAGCTTACAGTCCCTGTTGTCAAAGCTTCCTAGTAAACAGCCAATAACAGAAAAGGAGATGCATCGACGCCAGGACATGCTTGCAAATTTGAGATTGAAAGCCAACCAGATGGCCTCCACACTGAACATGTCCAGCTTTGCTAATAGGGATAGCTTGCTTGGACAAGATATAAAGCCAGCAGCAGATGTGATGAGCAGAACAACCGGGTTGGATAACTATGGTCTTGTTGGTTTTCAACGACAAGTAATGAAAGAACAAGATGAGGGTCTTGAGAAATTGGAAGAGACAGTATTAAGTACGAAACATATTGCATTGGCAGTAAACGAGGAACTCGATCTACACACTAGGCTTATTGATACCTTGGACCAACATGTGGAGTCAACAGACTCTCGGCTTCAGCGGGTGCAAAAGAGACTCGCAATTTTGAATAAGAGTACCAAGGGTGGATGCTCCTGCATGTGCTTGCTGTTAGCAGTCATCGCGATTGTGATTCTTGCTGTTGTTGCTTGGGCGCTGATCAAATACTTGTAA 705 0.4383 MTSSSDSWMRELNEASKLGDDINSMISEKGSLPPSGPDTQRHLSAIRRKITILGTRLDSLQSLLSKLPSKQPITEKEMHRRQDMLANLRLKANQMASTLNMSSFANRDSLLGQDIKPAADVMSRTTGLDNYGLVGFQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELDLHTRLIDTLDQHVESTDSRLQRVQKRLAILNKSTKGGCSCMCLLLAVIAIVILAVVAWALIKYL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01368 234 CDD SNARE_Qc 141 198 - -
Eupl01g01368 234 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 138 200 IPR000727 -
Eupl01g01368 234 Pfam SNARE domain 175 226 IPR000727 -
Eupl01g01368 234 Gene3D - 139 202 - -
Eupl01g01368 234 SMART tSNARE_6 133 200 IPR000727 -
Eupl01g01368 234 SUPERFAMILY SNARE fusion complex 129 200 - -
Eupl01g01368 234 PANTHER SYNTAXIN 20 219 IPR045242 -
Eupl01g01368 234 FunFam syntaxin-51 isoform X2 140 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01368 Eupl-Chr1 33980132 33993012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01368 1 234 SNARE and Associated Proteins AT1G16240 69.231 7.04e-116 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01368 K08503 - nnu:104589757 379.407