Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01358 ATGGAGGATAACCAGAAAGGGGATCCAACCGATAGTAGCGAGTACACATCGGAAGACGAGGGAACGGAGGATTACCGTCGTGGAGGTTACCACGCCGTACGAATCGGCGATACCTTTAGGGGCGGATGCTACGTCGTGCAGAGCAAACTCGGTTGGGGCCATTTCTCCACCGTATGGCTCGCTTGGGACACTCAGAACTCTCGATATGTAGCTCTGAAAGTCCAAAAGAGCGCTCAGCACTACACCGAAGCGGCAATGGATGAGATAACCATCCTCAAACAGGTCGCAGAGGGGGACCCAGATGACAAGAAGTGCGTTGTGAAGCTCTTGGATCATTTCAAGCACTCGGGGCCGAATGGGCAGCATGTCTGTATGGTTTTTGAGTTTCTGGGTGACAACCTTCTTACACTAATTAAGTATACTGATTACCGAGGAATGCCTCTCCACATGGTTAAGGAAATTTGTTTCCATATTCTAGTGGGTTTAGATTACTTGCATCGCCAGCTCTCTATCATACACACTGATCTGAAGCCGGAGAATATCTTGCTATTGTCCATGATTGACCTATCTAAAGATCCCAGGAAATCGGGTGTTCCTCTCATCCTTCCAAGTGGCAAGGATAAATCTGTGTTTGAATCTGGGGCCTCGAAAGATATTAAGAGTTCGAACGGGGATTTGACAAAGAGCCAGAAAAAGAAAATCCGAAGAAAGGCAAAGCGGGCAGCTCAGGGTTGTGCAGGGAAGGAAGCTTCTGAGGAAGCTGAATCGGATCTGAAAACAGCTGATGCTGTAGATTCTGCTGGTGATTCGAAATCAAATGTAGATGCCGGGGAAGACCATCCCAATAGTTCTGTTAGCAAAGATAGGTTGTCTAATGATGATGGGGTAAGGGATGCTCGGCAAGAAAATCAGGGTCATAGGAGAGGGAGTCGCTCCACGAGGCAGAAGCTGTTGCAATCAGTTGACCTCAACTGCAAATTGGTTGACTTTGGGAATGCCTGTTGGACGTATAAACAGTTCACGAGTGATATTCAGACAAGGCAGTATAGGTGTCCAGAGGTTCTCCTTGGATCTAAATACTCTACCTCGGCTGATTTATGGTCCTTTGCTTGCATATGTTTCGAGCTGGCAACTGGGGATGTTCTCTTTGATCCTCACAGTGGCGACAACTTTGATAGAGATGAGGATCACTTGGCACTGATGATGGAGCTTCTGGGGATGATGCCCCGCAAGATTGCGTTAGGTGGCCGTTATTCGCGGGACTTCTTCAACAGATATGGTGATTTGAGGCACATCCGCCGCTTGCGATTTTGGCCCCTTAGTAAGGTGCTCATAGAGAAGTACGATTTCAGCGAGCAAGATGCAAATGACATGGCCGATTTCCTGGTCCCCATACTGGATTTTGTTCCTGAGAAGCGTCCGACGGCAGCCCAATGCCTTCTCCACTCATGGATCAGTGGGGGCCCTCGTCGTCTTGAACCTTCTGGGTCTGCCATTCTAACCCAGGCTGCAGAGGGTGGTGTTTCTGAGATAAAGAAGAGGGAAAAGGATGAGAGGGAGGCAATGGAGGTGGGTGTCGGGAACATTGCCATTGATGGATCTTCAAGGCCAGTGAAAGGTCCTCAACCTAGTAGTAAACCCACAAAGGTGGCCATAATTAATTCTTCTAGGTAG 1674 0.4857 MEDNQKGDPTDSSEYTSEDEGTEDYRRGGYHAVRIGDTFRGGCYVVQSKLGWGHFSTVWLAWDTQNSRYVALKVQKSAQHYTEAAMDEITILKQVAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGMPLHMVKEICFHILVGLDYLHRQLSIIHTDLKPENILLLSMIDLSKDPRKSGVPLILPSGKDKSVFESGASKDIKSSNGDLTKSQKKKIRRKAKRAAQGCAGKEASEEAESDLKTADAVDSAGDSKSNVDAGEDHPNSSVSKDRLSNDDGVRDARQENQGHRRGSRSTRQKLLQSVDLNCKLVDFGNACWTYKQFTSDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLSKVLIEKYDFSEQDANDMADFLVPILDFVPEKRPTAAQCLLHSWISGGPRRLEPSGSAILTQAAEGGVSEIKKREKDEREAMEVGVGNIAIDGSSRPVKGPQPSSKPTKVAIINSSR* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01358 557 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01358 557 FunFam CMGC/SRPK protein kinase 30 129 - -
Eupl01g01358 557 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Eupl01g01358 557 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Eupl01g01358 557 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Eupl01g01358 557 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 508 - -
Eupl01g01358 557 CDD STKc_SRPK 33 485 - -
Eupl01g01358 557 MobiDBLite consensus disorder prediction 212 315 - -
Eupl01g01358 557 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01358 557 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01358 557 MobiDBLite consensus disorder prediction 1 24 - -
Eupl01g01358 557 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01358 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Eupl01g01358 557 MobiDBLite consensus disorder prediction 530 557 - -
Eupl01g01358 557 MobiDBLite consensus disorder prediction 272 309 - -
Eupl01g01358 557 MobiDBLite consensus disorder prediction 250 264 - -
Eupl01g01358 557 SUPERFAMILY Protein kinase-like (PK-like) 40 494 IPR011009 -
Eupl01g01358 557 MobiDBLite consensus disorder prediction 538 557 - -
Eupl01g01358 557 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01358 Eupl-Chr1 33836539 33844636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01358 7 536 EF-hand Containing Proteins AT5G22840 71.004 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Eupl01g01358 Pkinase 1.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01358 K08832 - nnu:104587284 944.495