Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01355 ATGTTGGCGTTGGTTGGTGGTGAAGGTGCAGGAGCAGCAGAAATGGAGAAGGATTTTGAGTCTAAGCTTCGTCTTCAGAACCCTAATCACCCTGTCCAGAGATCCAAGAGCTTTGCTTTCAGGGCCCCTCAGGAGAATTTCACTGTTCATGATTTTGAATTGGGCAAGATCTACGGCGTTGGTTCTTATTCCAAGGTTGTGAGGGCGAAGAAGAAGGACACGGGACATGTATATGCCTTGAAGATTATGGACAAAAAGTTCATCACCAAAGAAAATAAAACATCATATGTGAAGTTGGAACGCGTTGTACTTGATCAATTGGATCATCCTGGCATTGTCCGGCTATATTTTACATTTCAAGACACCTTTTCTCTGTACATGGCACTTGAATCATGTGAAGGTGGAGAACTTTTCGATCAAATAACCAGGAAAGGTCATCTGTCGGAGAATGAAGTTCGCTTCTATGCAGCAGAAGTTGTTGATGCTCTTGAATACATTCATGGTGTAGGGTTGATTCATCGGGATATTAAGCCAGAGAACTTGCTACTTACTGCAGAAGGGCATATTAAAATTGCTGACTTTGGTAGTGTACGGCCTATGAAGGACAGCCGAATCACACTGCTTCCATCTTTATCATCAGATGAAAAGGCTTGCACCTTTGTCGGAACAGCTGCATATGTCCCGCCAGAAGTCCTCAATTCTTCTCCAGCAACTTTTGGAAATGACCTTTGGGCACTTGGTTGCACCATATATCAGATGCTATCGGGAACTTCTCCCTTCAAAGATGCAAGTGAATGGCTCATTTTTCAAAGAATTATTGCCAGGGATTTGAGATTTCCGGACTACTTTTCGGTAGAAGCCAGAGATCTTATTGATAAGTTATTGGATATGGATCCCAGCAAAAGACCAGGTGCTGGACCTGATGGTTATGCTGCACTCAAGATGCATCCCTTCTTTAAGGGAGTTGACTGGAAAAATTTAAGAGTGCTATCTCCTCCGAAACCTGCTTTGGAGATAAAGACGGGCGAGGCTTATGATGTTCAGGATTGTGGATGGAACCTTTCACACGTTGGAGATGGTTCGGTCAGAAACAATGATGGAAGTGGTGGTGCTACATCATCTTCCGAAGCATCTGGTCATATAACTAGGCTTGCTTCTATCGACTCTTTTGATTCAAGATGGCAACAATTCCTGGATCCTGGGGAATCTATTGTTATGATCTCAATGGTGAAGAAAATTCAAAAGCTAACAAACAAGAAGGTGCAGCTTATCCTCACTGACAAACCCAAATTGATTTGTGTGGACCCGGCGAAGCTGATGCTCAAGGGGAACATGGTATGGTCCGACAACCTCAATGACCTCAACATCCAAGTCTCAAGTTCTTCACATTTCAAGATTTGCACGGTATGCTCCTCCCTTTTTCTATTTTCCTCCCATGCATGTAGTCCATTCTCTGAATTAGATGTCATGGAATGTTCAGCCAAAGAAGGTAATGTCGTTTGA 1503 0.4325 MLALVGGEGAGAAEMEKDFESKLRLQNPNHPVQRSKSFAFRAPQENFTVHDFELGKIYGVGSYSKVVRAKKKDTGHVYALKIMDKKFITKENKTSYVKLERVVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKGHLSENEVRFYAAEVVDALEYIHGVGLIHRDIKPENLLLTAEGHIKIADFGSVRPMKDSRITLLPSLSSDEKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTIYQMLSGTSPFKDASEWLIFQRIIARDLRFPDYFSVEARDLIDKLLDMDPSKRPGAGPDGYAALKMHPFFKGVDWKNLRVLSPPKPALEIKTGEAYDVQDCGWNLSHVGDGSVRNNDGSGGATSSSEASGHITRLASIDSFDSRWQQFLDPGESIVMISMVKKIQKLTNKKVQLILTDKPKLICVDPAKLMLKGNMVWSDNLNDLNIQVSSSSHFKICTVCSSLFLFSSHACSPFSELDVMECSAKEGNVV* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01355 500 Gene3D Phosphorylase Kinase; domain 1 50 135 - -
Eupl01g01355 500 SUPERFAMILY Protein kinase-like (PK-like) 27 338 IPR011009 -
Eupl01g01355 500 CDD STKc_PDK1 50 319 IPR039046 GO:0004674
Eupl01g01355 500 SMART serkin_6 52 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01355 500 FunFam 3-phosphoinositide-dependent protein kinase 2-like 50 135 - -
Eupl01g01355 500 Gene3D Transferase(Phosphotransferase) domain 1 136 329 - -
Eupl01g01355 500 Pfam PH domain 392 469 IPR033931 -
Eupl01g01355 500 ProSiteProfiles Protein kinase domain profile. 52 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01355 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Eupl01g01355 500 SUPERFAMILY PH domain-like 313 478 - -
Eupl01g01355 500 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 344 - -
Eupl01g01355 500 Pfam Protein kinase domain 54 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01355 500 FunFam 3-phosphoinositide-dependent protein kinase 1 365 483 - -
Eupl01g01355 500 FunFam 3-phosphoinositide-dependent protein kinase 2-like 136 334 - -
Eupl01g01355 500 Gene3D - 362 482 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01355 Eupl-Chr1 33813787 33822390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01355 15 468 AGC Kinase Gene Family AT3G10540 77.124 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Eupl01g01355 Pkinase 2.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01355 K06276 - nnu:104587314 816.224