Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01350 ATGGAAAACAATGGTTTGCCGGGAGGAATGCTGCCCGGTATGGCTTCTGGAATGCTAGGGCTAGAGATGCCTCTGCACCACCACCACCAACAACACCCCCAGATGGTAGCTTTCGCGGCTCACGACGCCGACCAATCTGTAAAACAGAATGCTTACCCTTACACCAGCAAAGGCAAGCAACAACAGCCAGCACTAAGCGATGAAGACGAGCCTGGGTTCACGGTGGAAGACGGTAACGGAGATGGAAGGAAGCGAGTCTCGCCATGGCAGAGAGTTAAATGGACAGACAACATGGTTAAGCTTCTCATTATGGTAGTATACTACGTCGGAGATGACGGTGGTCCTGAAGGCAACGACGCATCCAGCACCGCCAAGAAGAAATCAGGTGGGCAATTGCAGAAAAAAGGGAAGTGGAAATCGGTGTCGCGGGCGATGATGGAGAAGGGCTTCTATGTATCGCCGCAGCAATGCGAAGACAAGTTCAATGATCTTAACAAAAGGTACAAGAGAGTTAACGATATACTCGGGAAGGGCACAGCTTGTAGAGTGGTGGAGAATCAAACCCTACTCGACACAATGGATCAGATTTCCCCAAAAATGAAGGAGGAGGCGCGGAAGCTACTCAATTCCAAGCACCTCTTCTTCAGGGAGATGTGCGCTTACCATAACAGTGGTGGTGGTGGTGGTGGTGGCGGTGGTGGCGGTGGTGGCGGTGGTGTTGCAGGGACGGAAGTGACGGTGGAGTCTTATCACCATCAAAACCAGCAGCGTTGCTTCCATTCATCGGAGAACGCTGCTGTTACAGCTAATTCACGAAACAGGATCGAAACAGAGGGGTTCAAGATGATGAAAGGAGGAGGAGAAGAAGAAGATGAGGACGGTGAAGACAACGACGACAACGACGACGACGATGATGAAGATGATGACGAAGAAGATGAAATTAATGATCAGGATGAGGAGGGCGAAGAGATATTGTCGTCGAAGAAAAGACAGAAAAGGGGTATGTCCGCTTCATTGTCTTCAATTTCGCCATCGATACAACAATTGAAGTGTGAATTGATGAATGTACTTGAAGATGGGACGAAGACCGCGTGGGAGCAGAAACAGTGGATGAGAAACCGATCGTTACAATTGGAGGAGCAACGAGTGAGCTACCATTTCCAAGCATTTGAGCTTGAGAAGCAGAGATTGAAATGGGTAAAATTCAGTGGGAAGAAAGAGAGAGAGATGGAAAGGATGAAGCTTAATAACGAGCGAATGAGACTCGAAAACGAGAGAATGGTTCTTCTTCTTCGGCAGAAAGAACTGGAATTGATCGATCTCCATAAACAACAACATCCATCCAACAAAAGGCCGAACCCATCTTCCATCACGGGATGA 1380 0.4855 MENNGLPGGMLPGMASGMLGLEMPLHHHHQQHPQMVAFAAHDADQSVKQNAYPYTSKGKQQQPALSDEDEPGFTVEDGNGDGRKRVSPWQRVKWTDNMVKLLIMVVYYVGDDGGPEGNDASSTAKKKSGGQLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDQISPKMKEEARKLLNSKHLFFREMCAYHNSGGGGGGGGGGGGGGGVAGTEVTVESYHHQNQQRCFHSSENAAVTANSRNRIETEGFKMMKGGGEEEDEDGEDNDDNDDDDDEDDDEEDEINDQDEEGEEILSSKKRQKRGMSASLSSISPSIQQLKCELMNVLEDGTKTAWEQKQWMRNRSLQLEEQRVSYHFQAFELEKQRLKWVKFSGKKEREMERMKLNNERMRLENERMVLLLRQKELELIDLHKQQHPSNKRPNPSSITG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01350 459 MobiDBLite consensus disorder prediction 55 86 - -
Eupl01g01350 459 Gene3D - 94 170 - -
Eupl01g01350 459 SUPERFAMILY ARM repeat 288 327 IPR016024 -
Eupl01g01350 459 MobiDBLite consensus disorder prediction 256 275 - -
Eupl01g01350 459 Pfam Myb/SANT-like DNA-binding domain 91 220 IPR044822 -
Eupl01g01350 459 MobiDBLite consensus disorder prediction 289 320 - -
Eupl01g01350 459 Coils Coil 403 432 - -
Eupl01g01350 459 MobiDBLite consensus disorder prediction 117 138 - -
Eupl01g01350 459 MobiDBLite consensus disorder prediction 440 459 - -
Eupl01g01350 459 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
Eupl01g01350 459 MobiDBLite consensus disorder prediction 256 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01350 Eupl-Chr1 33751946 33753971 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl01g01350 Myb_DNA-bind_4 1.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01350 - - tss:122671588 552.362