Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01346 ATGGCCTCCTGCGACGACGATTTCGCCCTTCTCGGAGACGATAACCAATCCCCTCACCACCATCACACCTTCAATCCACATCGCTTCGCAACCAAGGCGACGCCCATCCACTCCCACCCGCCACCACCACAACCCCTTCCCCTTAACAGCATCGGCGGTGATGGAAGCCCTAAGAAAGTCGGTGGCGCTACAGCCGGAGAAGAAGAAGACGGCGATGACGACTACAGCGATGCCGGTTTCTGTTCTCAGGCCGACAACAAATGCCCTCCTCCCTTTCACGACGTGAATCCCTTCGCTGCCGAGGACGATGCGAACCCCTTTGCCGCTGACGACGAGTCTGACCCTAATAAATCTAGGGCTAATTCTCGGCCCGAGAAGCGCAAGGATCGCGATGAGCTTAGCGATGGAGGGACCTCTTACTATTACAAGAAATCGAAGCCCGGGGGTATTCACACCTCCGGTGGAGAGTACAGGGTAGAATACAGAGGAGATTACAGGAAGGATCGAGAGGAGTGGAGCGATTCGGCTATCGGTTGCCTTCTCGATTCGTACACGGAGAAATATGTTCAGCTTAATCGAGGGAATCTCCGGGGGAGGGATTGGGAGGAGGTGGCGACACTTGTGAGCGAGCGGTGCAATAAGCAGAAGTCTGGTAAGAGTGTGGAGCAGTGCAAGAACAAGGTGGATAATTTGAAGAAGAGGTATAAGGTGGAGAGGCAGCGGATGAGTAGCAGTGGTATGTCAGTCAGCCATTGGCCTTGGTTTAAGAAGATAGAGCAGATAGTAGGTAATTCGTCGTCGTCGAAGAATGCCTCGGACGAGGATAAGTCTGTGGGTGCTTCTGCTAATATGCTTAGGCCGGCAAAGAGATATCCAATTGCAACACCTAGTTCTGTTGGCTTGGCAAATAACGTAAAGTCAAAATCGCCGTCAAATCCTAGATGGCGGAGAGTGGTTTTCAAAATTAGTGGTGCTGCGTTAGCTGGGACTGGCCCTCAGAACATTGATCCAAAGGTGATTTTGTTGATTGCTAGGGAAGTTGCAATGGCTTCTCGCCTTGGTGTAGAGGTGGCAATTGTTATTGGAGGTCGTAATTTCTTTTGTGGAGACACATGGGTAGCTGCAACTGGCCTTGATAGATCTACAGCATACCAAATTGGAATGATGGCAACTGTGATGAACTCTATACTGCTTCAGTCAGCTTTAGAGAAACTGAGTGTTCCTACACGCGTACAAACTGCATTTCCAATGCAAGAGGTTGCTGAGCCATATAGCAAGCGACGGGCAATCCGGCATCTTGAAAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTGCCGGTACAGGAAATCCACTCTTCACCACAGATACAGCAGCGGCTCTCAGAGCTTCAGAGATCAATGCCAACGCAGTCCTCAAAGGTACCAATGTTGATGGTGTCTATGACTGCCATTCCAGAAACAACAACAATGCGGCATTTGAGCACATTTCTTTCAGGGAGTTGGTTTCCAGAGGTGTGACCTCCATGGACATGATGGCAATAACATTCTGTGAAGAGAATGGAATTCCTGTCGTTGTCTTTAATCTCCATGAGCCAGGCAACATTTCAAGAGCATTATGTGGAGACCAAGTTGGTACCCTGATAGATCAAGCAGGAAGGATTAGCTGA 1668 0.4964 MASCDDDFALLGDDNQSPHHHHTFNPHRFATKATPIHSHPPPPQPLPLNSIGGDGSPKKVGGATAGEEEDGDDDYSDAGFCSQADNKCPPPFHDVNPFAAEDDANPFAADDESDPNKSRANSRPEKRKDRDELSDGGTSYYYKKSKPGGIHTSGGEYRVEYRGDYRKDREEWSDSAIGCLLDSYTEKYVQLNRGNLRGRDWEEVATLVSERCNKQKSGKSVEQCKNKVDNLKKRYKVERQRMSSSGMSVSHWPWFKKIEQIVGNSSSSKNASDEDKSVGASANMLRPAKRYPIATPSSVGLANNVKSKSPSNPRWRRVVFKISGAALAGTGPQNIDPKVILLIAREVAMASRLGVEVAIVIGGRNFFCGDTWVAATGLDRSTAYQIGMMATVMNSILLQSALEKLSVPTRVQTAFPMQEVAEPYSKRRAIRHLEKGRVVIFGGIGAGTGNPLFTTDTAAALRASEINANAVLKGTNVDGVYDCHSRNNNNAAFEHISFRELVSRGVTSMDMMAITFCEENGIPVVVFNLHEPGNISRALCGDQVGTLIDQAGRIS* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01346 555 Pfam Myb/SANT-like DNA-binding domain 169 261 IPR044822 -
Eupl01g01346 555 NCBIfam UMP kinase 316 548 IPR015963 GO:0005737|GO:0006221|GO:0033862
Eupl01g01346 555 PANTHER URIDYLATE KINASE 166 554 - -
Eupl01g01346 555 Gene3D - 172 237 - -
Eupl01g01346 555 MobiDBLite consensus disorder prediction 110 137 - -
Eupl01g01346 555 Pfam Amino acid kinase family 317 528 IPR001048 -
Eupl01g01346 555 FunFam Aspartate/glutamate/uridylate kinase family protein 172 237 - -
Eupl01g01346 555 SUPERFAMILY Carbamate kinase-like 314 548 IPR036393 -
Eupl01g01346 555 MobiDBLite consensus disorder prediction 1 147 - -
Eupl01g01346 555 Hamap Uridylate kinase [pyrH]. 313 549 IPR015963 GO:0005737|GO:0006221|GO:0033862
Eupl01g01346 555 FunFam Uridylate kinase isoform A 307 554 - -
Eupl01g01346 555 Gene3D - 305 554 IPR036393 -
Eupl01g01346 555 CDD AAK_UMPK-PyrH-Ec 316 549 IPR015963 GO:0005737|GO:0006221|GO:0033862
Eupl01g01346 555 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01346 Eupl-Chr1 33709302 33718330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01346 150 272 Trihelix Transcription Factor Family AT3G14180 37.097 5.19e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl01g01346 AA_kinase 2.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01346 - - nnu:104612522 862.062