Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01345 ATGGCCGCGCCAAAACCACGTTCCTCTCGATCGTCCGCCCTGCGAGACTCCGACAACCCCCTCTCCGAGTCAGAGAAGATGGAGGGAGCTGGGAGTTGGGACGCGCTAGAATGGACTAAGATCGAGCCCGTTTCGAGGTATGTACATCACGGCATGTCGGAGCTTCTGTTGGAAGCGGAAGAGGTTATAGTGGAGGGTTTTGGCGTCGTTCTTGTAAATACTGATGAAGCAGGTACCTTGTTCATGACCAATTTTCGCCTTCTTTTTGTGAGCGAGGGAAGTAGGGACATCATTTCACTTGGAACAATACCATTGGCAACGATTGAGAAGTTCAGCAAACAAGCAATGAAGCAATCCGATAAGGCTCCATCACTCCGACTTCTCCAGGTTATCGGTAAAGACATGAGAATTATTGTCTTTGGTTTTCGCCCTCGGACAAAGCAGAGACGTGCTATGTTTGATGCATTATGGAGATATACAAGGCCAACACGATTGTGGGATCTTTATACATTTACTTGCGGACCTTCCAAGTTCAACAACACCAACCCAAAGGTGCGGTTATTGAATGAATATTTTCGACTTCTCGGAAAAGGTTCCTATCATGCATCAAGTAGTACCTTTGAAGATGGATCATTTTCTGTGTCTAATGACTGGTGGAGAATAAGTGGCGTAAATTCCAATTATACAATGTGCCCAACCTACCCTTTCTCCTTTATTGTTCCTAAATCTATCAGCGATGAAGAAGTGCTACAGGCTTCTACCTTTCGGGCAAGGTGTCGGTTTCCTGTGATTTCGTGGTGTCATCCAGGAACTGGAGCTGTTCTTGCACGTTCATCCCAACCTTTAGTTGGTCTCATGATGAACACAAGGAGCAATGCCGATGAAAAGCTTGTTGCCGCACTTTGCACTCAAATTGCTGGTGTAAAGGGACCACGGAGGAAGCTTTACATAGCTGATGCGAGACCTCGAAAAAATGCTTTGGCCAATGGGGCAATGGGAGGTGGTTCGGAGTCATCTTCTAATTATTTCCAATCTGAGATTGTTTTCTTTGGGATAGATAATATTCATGGCATGAGGGATAGTCTTGCTCGACTCAGAGATTACCTTGATACTCATGGTGCAACTTCTTCGGATGGAATGTCGTCATTCTTGAGAAATGGTGGATGGACATGGGGGGGAGGCAACTTAAGCAGTATGTCAGCTTCGGTTTCAACTCTTGGAGACAGCGGGTGGTTAATACACATTCAGAGTGTCCTAGCTGGTTCTGCTTGGATTGCTGCACATGTTGCTTTGGAATCATCCTCAGTGCTTGTGCATTGCAGTGATGGATGGGATCGAACAACTCAGCTGGTCTCACTTGCTAGTTTGCTGCTTGATCCTTATTATCGGACATTTAGCGGGTTTCAGGCACTTGTGGAAAAAGATTGGCTTGCATTTGGTCATCCATTTTCAGATCGCATGGGAGTGCCAACAATATCTGGAAATAGTAGCATGCCTTCAGAATTATCCCGGCAAACTTCAGTTGGGAATATTCCAACATCACCTATGCGCCACTCATCAGGATCATCATTCACATCTCAAGTTAGTGGATCATCTCATCTGCAGACATCAAGCAACTATTCTCCCATATTTTTGCAGTGGGTAGATTGTGTTTCACAGTTATTACGTATGTATCCTTTTGCATTTGAGTTCTCGTCGGTTTTCTTAGTTGATTTCTTGGACTGCATGCTGTCCTGTCGCTTTGGAAACTTTTTATGTAACAGTGAAAAGGAAAGGCTGCAATCTGGTGTTTTCGACTCTTGTGGGTGCCTGTGGGTATACTTGACCGATATGCGTGCTTCCAGAGGAAGTTCCCATGCGCACTATAACGTCTTTTATGATCCATTGAAACATGAAGGTCCACTATTACCTCCAGCAGCAGCATTAGCTCCAACTCTCTTGCCCCAATTCCATCTTCGGTGGGCCTGCCCCTCAGAAGCACAAGCTGGGGAGCTTGAAGCTCAATGTCGGATCATGGCTACAAAATTTTCTGAAATGCAGAAAGCAAAAGAAGCTGCAGAAAGGAAAGATAAAGACATCGCAACCAGCATGGAATTGTTAACCACAGAACTACGAAAGGAGAAGCAGCTCAGCGGCTCAGCCATGGTCTTGGCAAACAGGGTCTGCAAGGAGAGTGCAGCCATAAAACGTGCGATACTGTCACTTGGATGCAAGGTTCGCTTCTCAAATAGCGGTGACTGTTCGTTGGACATTGGAAACACCTCACCAGAAACGCAGCAAAAAATTATGTATTCTCCTCCAAGGAGAAACACAGATGGTAATGGGCAGTGGGAGGATAAACTGGATCTCTCTGTTTCTATTTCAGTTATGGCAGACGATGATGTTCCCAACAATCCAATCAGTGGAGTTTGTGAAACCCTTTGCCCGTTACGCACCAGAGAGGGTGGTTGCAAGTGGCCAGATGCTGGTTGTGCCCATCTTGGAAGCCAGTTTGTTGGATTGAAGGCAAACTTTGATGCACTCGATAAGCTTGCTATTTACGATTGTTATTTCGGATTGGAGTAG 2565 0.4565 MAAPKPRSSRSSALRDSDNPLSESEKMEGAGSWDALEWTKIEPVSRYVHHGMSELLLEAEEVIVEGFGVVLVNTDEAGTLFMTNFRLLFVSEGSRDIISLGTIPLATIEKFSKQAMKQSDKAPSLRLLQVIGKDMRIIVFGFRPRTKQRRAMFDALWRYTRPTRLWDLYTFTCGPSKFNNTNPKVRLLNEYFRLLGKGSYHASSSTFEDGSFSVSNDWWRISGVNSNYTMCPTYPFSFIVPKSISDEEVLQASTFRARCRFPVISWCHPGTGAVLARSSQPLVGLMMNTRSNADEKLVAALCTQIAGVKGPRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHGMRDSLARLRDYLDTHGATSSDGMSSFLRNGGWTWGGGNLSSMSASVSTLGDSGWLIHIQSVLAGSAWIAAHVALESSSVLVHCSDGWDRTTQLVSLASLLLDPYYRTFSGFQALVEKDWLAFGHPFSDRMGVPTISGNSSMPSELSRQTSVGNIPTSPMRHSSGSSFTSQVSGSSHLQTSSNYSPIFLQWVDCVSQLLRMYPFAFEFSSVFLVDFLDCMLSCRFGNFLCNSEKERLQSGVFDSCGCLWVYLTDMRASRGSSHAHYNVFYDPLKHEGPLLPPAAALAPTLLPQFHLRWACPSEAQAGELEAQCRIMATKFSEMQKAKEAAERKDKDIATSMELLTTELRKEKQLSGSAMVLANRVCKESAAIKRAILSLGCKVRFSNSGDCSLDIGNTSPETQQKIMYSPPRRNTDGNGQWEDKLDLSVSISVMADDDVPNNPISGVCETLCPLRTREGGCKWPDAGCAHLGSQFVGLKANFDALDKLAIYDCYFGLE* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01345 854 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 213 654 IPR029021 -
Eupl01g01345 854 MobiDBLite consensus disorder prediction 495 528 - -
Eupl01g01345 854 ProSiteProfiles Myotubularin phosphatase domain. 199 651 IPR010569 -
Eupl01g01345 854 PANTHER MYOTUBULARIN-RELATED 29 770 IPR030564 -
Eupl01g01345 854 CDD PTP-MTM-like 259 553 - -
Eupl01g01345 854 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Eupl01g01345 854 SMART gram2001c 45 115 IPR004182 -
Eupl01g01345 854 SUPERFAMILY PH domain-like 56 173 - -
Eupl01g01345 854 MobiDBLite consensus disorder prediction 1 28 - -
Eupl01g01345 854 Gene3D - 68 160 IPR011993 -
Eupl01g01345 854 Pfam Myotubularin-like phosphatase domain 184 592 IPR010569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01345 Eupl-Chr1 33651190 33707401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01345 1 851 Protein tyrosine phosphatase (PTP) family AT3G10550 67.599 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01345 K18081 - ming:122087901 1396.33