Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01330 ATGATTGGTCAAGGTGTTGAAGTTAAAGCTGGAGAGCCTCTTAAGGTTGAAATGAACAGTGAAAAGATTTTGCATCTCTCACAGGCATCCCTTGGTGAGGCAAAGAAGGACAAGGGAAATGAATCGATTCCCCTCTTTGTGAAGATTGGTGATCAAAAACTTGTTCTGGGAACACTATCTCATGAGAAGTGCACTCATATATCTTTTGATTTGGTGTTTGAGAAAGAATTTGAACTCTCCCACAGCTGGAAAAATGGGAGCGTCTACTTCTGCGGTTACACATCTGTCTTACCAGACGGCGAGACGTCCGATGATTTAGATTCTGAATCTGATTTTGGAGAGGATCATCCGCTCAGTTTTAGGGAGAATGGAAAACCTGAGCCGAAAGATGAGCAGTTAAAGCCTATTACAGTTAAGGCCAATGCTGGCAAGCCTGGTTCTTCTGCAGCTAAACCAAAGGTGAAAGTTGTGGAACCAAATAAAGATGATAAACCCAAGGAAGATGATGATGAGGATGATGATAGTGGAGATGACGATACTAGTGATGATTCTGAGGATGATGAATCTGATGACGAGGACATGCTTGAGGCTGGGGGCGAAAGTGACGAGGACGATGATGATGAAAGCTCGGATGAGGAAGATGAAGCTACACCTAAGAAGGCTGAACTGAAAAAGAAGAGACCTGCAGAATCTGCTACTAAGACACCCGTTCCCGAGAAAAAGGCTAAATTATTTACACCTCAAAAGACAGGTGGTGAAGGGAAGAAGGTTGGTGGCCATACAGCGACTCCCTACCCTTCAAAGCAGGCTGGGAAATCCCCTGCCAATAGCGACAAGTCAAAGCAGCAGACTCCTAAATCTGCTGGTCAGGTCTCTTGCAAGTCTTGTAGCAAGACATTCAACTCGGATAATGCTCTACAAGCCCATTCAAAGGCGAAGCACAGCGATGGCAAGTGA 957 0.4493 MIGQGVEVKAGEPLKVEMNSEKILHLSQASLGEAKKDKGNESIPLFVKIGDQKLVLGTLSHEKCTHISFDLVFEKEFELSHSWKNGSVYFCGYTSVLPDGETSDDLDSESDFGEDHPLSFRENGKPEPKDEQLKPITVKANAGKPGSSAAKPKVKVVEPNKDDKPKEDDDEDDDSGDDDTSDDSEDDESDDEDMLEAGGESDEDDDDESSDEEDEATPKKAELKKKRPAESATKTPVPEKKAKLFTPQKTGGEGKKVGGHTATPYPSKQAGKSPANSDKSKQQTPKSAGQVSCKSCSKTFNSDNALQAHSKAKHSDGK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01330 318 Gene3D Nucleoplasmin core domain 3 98 - -
Eupl01g01330 318 FunFam Histone deacetylase HDT1 1 99 - -
Eupl01g01330 318 Pfam Nucleoplasmin-like domain 5 93 IPR041232 -
Eupl01g01330 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 291 318 IPR013087 -
Eupl01g01330 318 MobiDBLite consensus disorder prediction 266 308 - -
Eupl01g01330 318 MobiDBLite consensus disorder prediction 101 318 - -
Eupl01g01330 318 ProSitePatterns Zinc finger C2H2 type domain signature. 293 314 IPR013087 -
Eupl01g01330 318 MobiDBLite consensus disorder prediction 112 134 - -
Eupl01g01330 318 MobiDBLite consensus disorder prediction 214 237 - -
Eupl01g01330 318 MobiDBLite consensus disorder prediction 165 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01330 Eupl-Chr1 33444576 33449360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01330 1 315 C2H2 Transcription Factor Family AT5G03740 43.168 5.24e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01330 - - msin:131234755 380.563