Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01326 ATGAAGGAGTTATGGACATCTTTGGCTTCGTTGATGGGCGTCTTTGCCTTTTGCCAGACCTTACTCCATGCTGTATTTCCTCCGGAGCTACGCTTCGCATCAGTCAAGCTTTTCAACCGTATCTTTCACTGGTTCTCCTCTTACTGCTATTTCGATATCACCGAGATCGACGGTGTAAACACCAACGAGCTCTATAACGCTGTTCAGCTCTATCTGAGCAGCTCCGCTTCGATCACAGGTAGTCGTCTTAGCCTCACTCGAGCCCTCAATTCAAGTGCCTTCACATTTGGCCTATCAAACAACGACTGCCTTGTCGACACCTTTAATGGCATCACCGCCTGGTGGGAGCACATCGTCACGCAACGACAGTCGCAGACCTTCTCATGGAGGCCTCTTCCCGAGGAGAAGAGAGGCTTCACTCTTCGAATCAAGAAGAAAGACAAAGCGTTGATCCTCGATTCATATCTCGATTACATCATGGCTCAGGCCAATGAGATCCGGCGGAAGAATCAGGATCGTCTCCTTTACACTAATTCACGCGGTGGATCGCTCGATTCGCGTGGGCACCCATGGGAATCGGTGCCCTTCAAGCACCCAAGTACGTTTGAGACATTGGCCATGGACCCGGCAAAGAAAACCGAAATAATGGCTGATCTTCGAGATTTCGCTGATGGGCAATCCTTCTATCAGAAAACGGGTCGGGCGTGGAAAAGAGGCTACCTTCTCTACGGCCCGCCTGGTACAGGGAAATCCAGCATGATCGCAGCCATGGCTAATTACCTCGGTTATGATATCTATGATCTTGAATTAACAGAAGTTAATACAAACTCAGAGCTCCGAAAGCTACTAATGAAGACGACATCGAAATCTATAATTGTGATAGAAGACATTGATTGCTCAATCAATCTCACAAACAGGAAGAAATCGACAGGGAGAACCCACTACGAGCCAGCAACTCCAGAGATGCGAGGTGGGTCGGGTTCAATTGGTGAAGAAGTTGGGAATTCGATCACCCTTTCGGGTTTACTGAATTTTACGGACGGGTTGTGGTCTTGCTGTGGAAGCGAGAGGATTTTCGTGTTCACAACGAACCACATTGAGAAGCTTGACCCGGCATTGCTGCGATGTGGGCGAATGGACATGCACATCTTCATGAACCACTGCTCGTTTCCTTCTTTGAAAATTCTTTTCAAAAATTATTTGGGATTGGAAGAAGGAGATTTGGAATTAGAAGAATGGGTGTTGAAGGAATTGGAGGATGTGATCGAGAAGGCGGAGATGACTCCAGCTGATATCAGTGAAGTGTTGATCAAGAACAGACGTGATAAAGGGAAGGCAGTAATGGAGTTGTTGGATGCTTTGAAGAAACGGGCGGAGAGGAATCAGAGTGCTGGTTCAAGGGAGAAGAATTCGAAGGATATGGAAGAGGAGGAACAGGAGAAGAGGGCATTGGAGACACCCAAAGAAGGTTGCGAGTTGCCGGAGAAATGCAGCAAAGGAGGAGATGAGGAGAAGATACTTTAA 1524 0.4764 MKELWTSLASLMGVFAFCQTLLHAVFPPELRFASVKLFNRIFHWFSSYCYFDITEIDGVNTNELYNAVQLYLSSSASITGSRLSLTRALNSSAFTFGLSNNDCLVDTFNGITAWWEHIVTQRQSQTFSWRPLPEEKRGFTLRIKKKDKALILDSYLDYIMAQANEIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFETLAMDPAKKTEIMADLRDFADGQSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVNTNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKKSTGRTHYEPATPEMRGGSGSIGEEVGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRCGRMDMHIFMNHCSFPSLKILFKNYLGLEEGDLELEEWVLKELEDVIEKAEMTPADISEVLIKNRRDKGKAVMELLDALKKRAERNQSAGSREKNSKDMEEEEQEKRALETPKEGCELPEKCSKGGDEEKIL* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01326 507 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Eupl01g01326 507 Pfam ATPase family associated with various cellular activities (AAA) 241 385 IPR003959 GO:0005524|GO:0016887
Eupl01g01326 507 Gene3D - 192 387 IPR027417 -
Eupl01g01326 507 SMART AAA_5 236 389 IPR003593 GO:0016887
Eupl01g01326 507 MobiDBLite consensus disorder prediction 458 507 - -
Eupl01g01326 507 PANTHER BCS1 AAA-TYPE ATPASE 7 462 - -
Eupl01g01326 507 CDD RecA-like_BCS1 215 385 - -
Eupl01g01326 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 448 IPR027417 -
Eupl01g01326 507 Coils Coil 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01326 Eupl-Chr1 33402064 33405369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01326 210 383 Calmodulin-binding Proteins AT3G56690 24.725 9.87e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01326 - - nnu:104599136 885.56